RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 PAX8Q06710 450 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 FAM162BQ5T6X4 162 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 DUX3Q96PT4 197 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 TMEM191AQ9H0A3 160 aa12.7□□□□□ -0.38
RAB40B-206ENST00000571995 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 IFI27P40305 119 aaPredicted RBP12.69□□□□□ -0.38
RAB40B-206ENST00000571995 PSG3Q16557 428 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 LY96Q9Y6Y9 160 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 CHD6Q8TD26 2715 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 PSG9Q00887 426 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 FANCD2OSQ96PS1 177 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 ALKBH7Q9BT30 221 aaPredicted RBP12.69□□□□□ -0.38
RAB40B-206ENST00000571995 USP24Q9UPU5 2620 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 VWC2LB2RUY7 222 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 ZNF688P0C7X2 276 aa12.69□□□□□ -0.38
RAB40B-206ENST00000571995 DPF1Q92782 380 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 RAB37Q96AX2 223 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 UQCR10Q9UDW1 63 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 COL27A1Q8IZC6 1860 aaPredicted RBP12.68□□□□□ -0.38
RAB40B-206ENST00000571995 TRBV12-3P01733 135 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 PAX1P15863 534 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 OR10J6PQ8NGY7 276 aa12.68□□□□□ -0.38
RAB40B-206ENST00000571995 TRAV26-2A0A0B4J265 109 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 CENPVL3A0A0U1RRI6 287 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 C7orf71A4D174 169 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 SMIM17P0DL12 118 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 BMI1P35226 326 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 UBE2E1P51965 193 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 ZNF414Q96IQ9 312 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 PHLDA3Q9Y5J5 127 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 AGRNO00468 2067 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 COA6Q5JTJ3 125 aaKnown RBP12.67□□□□□ -0.38
RAB40B-206ENST00000571995 TRAV9-1A0A075B6T8 112 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 PSMB11A5LHX3 300 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 NUDT3O95989 172 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 CTSGP08311 255 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 EBLN2Q6P2I7 272 aa12.67□□□□□ -0.38
RAB40B-206ENST00000571995 GATA1P15976 413 aaPredicted RBP12.66□□□□□ -0.38
RAB40B-206ENST00000571995 LINC00310P59036 64 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 OR10J3Q5JRS4 329 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 Q8N9W7 124 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 SIGLEC15Q6ZMC9 328 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 OR4X2Q8NGF9 303 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 TEX15Q9BXT5 2789 aa12.66□□□□□ -0.38
RAB40B-206ENST00000571995 H3BRN7 92 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 PTTG1IPP53801 180 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 SAPCD1Q5SSQ6 148 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 OR11H6Q8NGC7 330 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
RAB40B-206ENST00000571995 TMEM208Q9BTX3 173 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 Q0VG73 95 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 FBLL1A6NHQ2 334 aaKnown RBP12.65□□□□□ -0.38
RAB40B-206ENST00000571995 FABP5P3A8MUU1 101 aa12.65□□□□□ -0.38
RAB40B-206ENST00000571995 TNFRSF13BO14836 293 aaPredicted RBP12.65□□□□□ -0.38
RAB40B-206ENST00000571995 CACNG7P62955 275 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 CRYGCP07315 174 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 MINOS1Q5TGZ0 78 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 STPG4Q8N801 248 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 MOB4Q9Y3A3 225 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 MINOS1-NBL1R4GNA1 71 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 IGHV4-59P01825 116 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 ZFP30Q9Y2G7 519 aa12.64□□□□□ -0.39
RAB40B-206ENST00000571995 LTAP01374 205 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 FAM106AQ4KMX7 169 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 LAMTOR2Q9Y2Q5 125 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 HRNRQ86YZ3 2850 aaPredicted RBP12.63□□□□□ -0.39
RAB40B-206ENST00000571995 EGR2P11161 476 aaPredicted RBP12.63□□□□□ -0.39
RAB40B-206ENST00000571995 C21orf62-AS1Q17RA5 79 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 MRGPRG-AS1Q2M3A8 158 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 OR10AG1Q8NH19 301 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 CFHR4Q92496 578 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 TMEM160Q9NX00 188 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 COL5A1-AS1Q5SY13 56 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 MRPL27Q9P0M9 148 aaKnown RBP12.63□□□□□ -0.39
RAB40B-206ENST00000571995 A0A087X0K7 114 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 IGHV1-69DA0A0B4J2H0 117 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 IGHV1-69P01742 117 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 DEFB136Q30KP8 78 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 PRSS57Q6UWY2 283 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 RNF5Q99942 180 aa12.63□□□□□ -0.39
RAB40B-206ENST00000571995 TEP1Q99973 2627 aaKnown RBP12.62□□□□□ -0.39
RAB40B-206ENST00000571995 IGLV11-55A0A075B6I3 123 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 IGLL1P15814 213 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 Q6ZQT7 251 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 ORMDL3Q8N138 153 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 FOXE3Q13461 319 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 PSMG4Q5JS54 123 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 Q6ZS46 218 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 MSMBP08118 114 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 LMO4P61968 165 aa12.62□□□□□ -0.39
RAB40B-206ENST00000571995 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
RAB40B-206ENST00000571995 TRAV8-6A0A0B4J262 113 aa12.61□□□□□ -0.39
RAB40B-206ENST00000571995 CRYGBP07316 175 aa12.61□□□□□ -0.39
RAB40B-206ENST00000571995 PRR25Q96S07 402 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms