RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ARPC5LQ9BPX5 153 aa10.39□□□□□ -0.75
LITAF-208ENST00000571627 ACTR3CQ9C0K3 210 aaPredicted RBP10.39□□□□□ -0.75
LITAF-208ENST00000571627 SH3BGRL3Q9H299 93 aa10.39□□□□□ -0.75
LITAF-208ENST00000571627 DKK2Q9UBU2 259 aa10.39□□□□□ -0.75
LITAF-208ENST00000571627 IGHV4-4A0A075B6R2 117 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 STAG3L2P0CL84 134 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 STAG3L3P0CL85 134 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 FAM74A1Q5RGS3 127 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 LGALS9CQ6DKI2 356 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 RXFP4Q8TDU9 374 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 RAB24Q969Q5 203 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 C20orf144Q9BQM9 153 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 Q9H3A6 140 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 CYTL1Q9NRR1 136 aa10.38□□□□□ -0.75
LITAF-208ENST00000571627 TEX48A0A1B0GUV7 120 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 CT45A10P0DMU9 189 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 C9orf47Q6ZRZ4 202 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 OR11H4Q8NGC9 324 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 LINC01587Q99440 93 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 NIPSNAP3BQ9BS92 247 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 OTORQ9NRC9 128 aa10.37□□□□□ -0.75
LITAF-208ENST00000571627 J3KRW8 73 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 HMGB3O15347 200 aaKnown RBP10.36□□□□□ -0.75
LITAF-208ENST00000571627 EIF3GO75821 320 aaKnown RBP eCLIP10.36□□□□□ -0.75
LITAF-208ENST00000571627 ARL14EPLP0DKL9 152 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 HTN1P15515 57 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 HTN3P15516 51 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 AZU1P20160 251 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 TCTAP57738 103 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 ERCC8Q13216 396 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 AKR1C8PQ5T2L2 129 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 TMEM78Q5T7P6 136 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 ARL6IP6Q8N6S5 226 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 AGPAT4-IT1Q9H0P7 198 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 DNAH6Q9C0G6 4158 aa10.36□□□□□ -0.75
LITAF-208ENST00000571627 KANTRA0A1W2PQU2 76 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 RBAKDNA6NC62 111 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 H7BYZ3 331 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 CXorf1O96002 111 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 SLC25A5P05141 298 aaKnown RBP10.35□□□□□ -0.75
LITAF-208ENST00000571627 TAS2R60P59551 318 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 EIF5AP63241 154 aaKnown RBP10.35□□□□□ -0.75
LITAF-208ENST00000571627 TCTE3Q8IZS6 198 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 CMTM2Q8TAZ6 248 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 ST6GAL2Q96JF0 529 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 TMEM167BQ9NRX6 74 aa10.35□□□□□ -0.75
LITAF-208ENST00000571627 IGKV2-40A0A087WW87 121 aaPredicted RBP10.34□□□□□ -0.75
LITAF-208ENST00000571627 CTXND1A0A1B0GTU2 59 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 PLAC8L1A1L4L8 177 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 PGPA6NDG6 321 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 BCL2L11O43521 198 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 IGKV2D-40P01614 121 aaPredicted RBP10.34□□□□□ -0.75
LITAF-208ENST00000571627 NMBP08949 121 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 GCHFRP30047 84 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 DAD1P61803 113 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 GFI1BQ5VTD9 330 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 SUN5Q8TC36 379 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 FAM19A4Q96LR4 140 aa10.34□□□□□ -0.75
LITAF-208ENST00000571627 TRBV7-9A0A0J9YWB2 115 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 DIRC3C9JPN6 131 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 CRISP2P16562 243 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 ZNF138P52744 262 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 HYLS1Q96M11 299 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 VGLL1Q99990 258 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 ZNF471Q9BX82 626 aaPredicted RBP10.33□□□□□ -0.76
LITAF-208ENST00000571627 ZNF492Q9P255 531 aa10.33□□□□□ -0.76
LITAF-208ENST00000571627 C7orf71A4D174 169 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 KLLNB2CW77 178 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 PFDN1O60925 122 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 SEC11BP0C7V7 166 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 ZNF493Q6ZR52 646 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 TMUB2Q71RG4 321 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 C16orf74Q96GX8 76 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 NDUFAF3Q9BU61 184 aa10.32□□□□□ -0.76
LITAF-208ENST00000571627 FRAS1Q86XX4 4008 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 DNAH10Q8IVF4 4471 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 TRAV12-3A0A0B4J271 114 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 SERTM2A0A1B0GWG4 89 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 LYRM9A8MSI8 78 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 UMAD1C9J7I0 102 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 GPX1P07203 203 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 DEFB130BP0DP73 79 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 DEFB130AP0DP74 79 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 ZNF726P1Q15940 193 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 CCDC28AQ8IWP9 274 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 TMED6Q8WW62 240 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 PYGO2Q9BRQ0 406 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 LENEPQ9Y5L5 61 aa10.31□□□□□ -0.76
LITAF-208ENST00000571627 C1QBP02746 253 aa10.3□□□□□ -0.76
LITAF-208ENST00000571627 RNASE4P34096 147 aaKnown RBP10.3□□□□□ -0.76
LITAF-208ENST00000571627 SSX7Q7RTT5 188 aa10.3□□□□□ -0.76
LITAF-208ENST00000571627 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
LITAF-208ENST00000571627 IQCF2Q8IXL9 164 aa10.3□□□□□ -0.76
LITAF-208ENST00000571627 C5orf17Q8NAS9 161 aa10.3□□□□□ -0.76
LITAF-208ENST00000571627 RNASE8Q8TDE3 154 aaKnown RBP10.3□□□□□ -0.76
LITAF-208ENST00000571627 TMEM263Q8WUH6 116 aaKnown RBP10.3□□□□□ -0.76
LITAF-208ENST00000571627 hCG_2014768A0A024R1R8 64 aa10.29□□□□□ -0.76
LITAF-208ENST00000571627 A0A1W2PRE2 83 aa10.29□□□□□ -0.76
LITAF-208ENST00000571627 TPT1P13693 172 aaKnown RBP10.29□□□□□ -0.76
LITAF-208ENST00000571627 TMEM88Q6PEY1 159 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms