RNA–Protein interactions for RNA: ENST00000571018.5

TVP23B-204, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-204ENST00000571018 PHYHIPLQ96FC7 376 aa9.03□□□□□ -0.96
TVP23B-204ENST00000571018 PSMG3Q9BT73 122 aaPredicted RBP9.03□□□□□ -0.96
TVP23B-204ENST00000571018 AGPAT4-IT1Q9H0P7 198 aa9.03□□□□□ -0.96
TVP23B-204ENST00000571018 DYNC2H1Q8NCM8 4307 aaKnown RBP9.02□□□□□ -0.96
TVP23B-204ENST00000571018 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 PLAC8L1A1L4L8 177 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 G3V3Q6 166 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 H2AFB1P0C5Y9 115 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 ATP6V0CP27449 155 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 RAB2AP61019 212 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 RANP62826 216 aaKnown RBP9.02□□□□□ -0.97
TVP23B-204ENST00000571018 ERCC8Q13216 396 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 OR10G4Q8NGN3 311 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 OR10G9Q8NGN4 311 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 OR10G7Q8NGN6 311 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 FAM19A4Q96LR4 140 aa9.02□□□□□ -0.97
TVP23B-204ENST00000571018 IGHV4-4A0A075B6R2 117 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 LYRM9A8MSI8 78 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 EIF3GO75821 320 aaKnown RBP eCLIP9.01□□□□□ -0.97
TVP23B-204ENST00000571018 SLC25A5P05141 298 aaKnown RBP9.01□□□□□ -0.97
TVP23B-204ENST00000571018 SERF2P84101 59 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 PQLC2Q6ZP29 291 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 ZNF493Q6ZR52 646 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 C16orf74Q96GX8 76 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 Q9H3A6 140 aa9.01□□□□□ -0.97
TVP23B-204ENST00000571018 IGKV2-40A0A087WW87 121 aaPredicted RBP9□□□□□ -0.97
TVP23B-204ENST00000571018 TRAV12-3A0A0B4J271 114 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 KLLNB2CW77 178 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 J3KRW8 73 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 IGKV2D-40P01614 121 aaPredicted RBP9□□□□□ -0.97
TVP23B-204ENST00000571018 NMBP08949 121 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 HTN1P15515 57 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 CRISP2P16562 243 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 CSN1S1P47710 185 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 DAD1P61803 113 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 TMEM78Q5T7P6 136 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 RNASE8Q8TDE3 154 aaKnown RBP9□□□□□ -0.97
TVP23B-204ENST00000571018 TMEM263Q8WUH6 116 aaKnown RBP9□□□□□ -0.97
TVP23B-204ENST00000571018 VGLL1Q99990 258 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 ZNF492Q9P255 531 aa9□□□□□ -0.97
TVP23B-204ENST00000571018 BORCS7-ASMTA0A0B4J1R7 106 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 C7orf71A4D174 169 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 MBP02144 154 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 CDC34P49427 236 aaPredicted RBP8.99□□□□□ -0.97
TVP23B-204ENST00000571018 RPL7L1Q6DKI1 246 aaKnown RBP8.99□□□□□ -0.97
TVP23B-204ENST00000571018 CCDC28AQ8IWP9 274 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 RXFP4Q8TDU9 374 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 GNPNAT1Q96EK6 184 aaPredicted RBP8.99□□□□□ -0.97
TVP23B-204ENST00000571018 FAM210BQ96KR6 192 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 PYGO2Q9BRQ0 406 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 SH3BGRL3Q9H299 93 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 TIMM8BQ9Y5J9 83 aaPredicted RBP8.99□□□□□ -0.97
TVP23B-204ENST00000571018 RYR2Q92736 4967 aa8.99□□□□□ -0.97
TVP23B-204ENST00000571018 TRBV7-9A0A0J9YWB2 115 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 HMGB3O15347 200 aaKnown RBP8.98□□□□□ -0.97
TVP23B-204ENST00000571018 ARPC5O15511 151 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 ZNF324O75467 553 aaPredicted RBP8.98□□□□□ -0.97
TVP23B-204ENST00000571018 STAG3L2P0CL84 134 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 STAG3L3P0CL85 134 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 ZNF138P52744 262 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 CD300CQ08708 224 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 ZFAND2AQ8N6M9 145 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 RAB24Q969Q5 203 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 NDUFAF3Q9BU61 184 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 OTORQ9NRC9 128 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 SACSQ9NZJ4 4579 aa8.98□□□□□ -0.97
TVP23B-204ENST00000571018 PGPA6NDG6 321 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 DIRC3C9JPN6 131 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 TAAR5O14804 337 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 GPX1P07203 203 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 ARL14EPLP0DKL9 152 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 DEFB130BP0DP73 79 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 DEFB130AP0DP74 79 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 HTN3P15516 51 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 BTN1A1Q13410 526 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 FAM74A1Q5RGS3 127 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 ARL6IP6Q8N6S5 226 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 LINC00467Q9BRT7 94 aa8.97□□□□□ -0.97
TVP23B-204ENST00000571018 SMLR1H3BR10 107 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 RNASE4P34096 147 aaKnown RBP8.96□□□□□ -0.98
TVP23B-204ENST00000571018 Q8TAT8 98 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 CMTM2Q8TAZ6 248 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 SUN5Q8TC36 379 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 HYLS1Q96M11 299 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 ACTR3CQ9C0K3 210 aaPredicted RBP8.96□□□□□ -0.98
TVP23B-204ENST00000571018 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
TVP23B-204ENST00000571018 CYTL1Q9NRR1 136 aa8.96□□□□□ -0.98
TVP23B-204ENST00000571018 LYSTQ99698 3801 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 CBY3A6NI87 242 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 GCHFRP30047 84 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 PRR9Q5T870 116 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 LINC00612Q8N6U2 182 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 TMED6Q8WW62 240 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 LENEPQ9Y5L5 61 aa8.95□□□□□ -0.98
TVP23B-204ENST00000571018 PLECQ15149 4684 aaKnown RBP8.94□□□□□ -0.98
TVP23B-204ENST00000571018 SNURFLB1AK76 121 aa8.94□□□□□ -0.98
TVP23B-204ENST00000571018 CXorf1O96002 111 aa8.94□□□□□ -0.98
TVP23B-204ENST00000571018 ATP5G1P05496 136 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms