RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 KRTAP10-8P60410 259 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 RAB31Q13636 194 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 GAMTQ14353 236 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 SPANXN5Q5MJ07 72 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 C9orf129Q5T035 196 aaKnown RBP2.74□□□□□ -1.97
NUP88-202ENST00000570937 SAMD13Q5VXD3 122 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 ADAMTSL5Q6ZMM2 481 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 C12orf45Q8N5I9 185 aaPredicted RBP2.74□□□□□ -1.97
NUP88-202ENST00000570937 OR10P1Q8NGE3 313 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 OR51G1Q8NGK1 321 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 ZNF431Q8TF32 576 aaPredicted RBP2.74□□□□□ -1.97
NUP88-202ENST00000570937 SMIM8Q96KF7 97 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 RNF2Q99496 336 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 MAGT1Q9H0U3 335 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 PSENENQ9NZ42 101 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 RABAC1Q9UI14 185 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 FLVCR2Q9UPI3 526 aa2.74□□□□□ -1.97
NUP88-202ENST00000570937 PUS1Q9Y606 427 aaKnown RBP eCLIP2.74□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3OR16-8A0A075B7F1 116 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 LOC102724200A0A096LPH7 203 aaPredicted RBP2.73□□□□□ -1.97
NUP88-202ENST00000570937 SMCO3A2RU48 225 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IZUMO1RA6ND01 250 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 ZNF98A6NK75 572 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 ADAP1O75689 374 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IGKV1-17P01599 117 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IL4P05112 153 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IL5P05113 134 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IGLC1P0CG04 106 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IAPPP10997 89 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 CRYBB3P26998 211 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 SNRPD3P62318 126 aaKnown RBP2.73□□□□□ -1.97
NUP88-202ENST00000570937 SELENOTP62341 195 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 HBG1P69891 147 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 HBG2P69892 147 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 AKR1C1Q04828 323 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 TIGITQ495A1 244 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 C1orf194Q5T5A4 169 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 OR8G2PQ6IF36 304 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 TCF24Q7RTU0 167 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 SBSPONQ8IVN8 264 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 DEFB125Q8N687 156 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 BPIFCQ8NFQ6 507 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 C2orf50Q96LR7 162 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 GPR82Q96P67 336 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 TRGV9Q99603 122 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 PBDC1Q9BVG4 233 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 GGACTQ9BVM4 153 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 GGTLC1Q9BX51 225 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 VSIRQ9H7M9 311 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 NPVFQ9HCQ7 196 aa2.73□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3OR16-13A0A075B7E8 117 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-49A0A0A0MS15 119 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-74A0A0B4J1X5 117 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 IGHV3-66A0A0C4DH42 116 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 KIR2DL5BA0A0G2JN68 375 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 KIR2DL5BA0A0G2JPC4 375 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 FNDC10F2Z333 226 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 INMT-MINDY4F8WBC2 141 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 SSNA1O43805 119 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 DUSP14O95147 198 aaKnown RBP2.72□□□□□ -1.97
NUP88-202ENST00000570937 CD7P09564 240 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 PET100P0DJ07 73 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 S100A11P31949 105 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 GALR1P47211 349 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 P2RY1P47900 373 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 TFPI2P48307 235 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 CAV2P51636 162 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 S100A10P60903 97 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 NUTF2P61970 127 aaKnown RBP2.72□□□□□ -1.97
NUP88-202ENST00000570937 TMEM41BQ5BJD5 291 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 Q6ZVH6 145 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 TMEM144Q7Z5S9 345 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 ZNF546Q86UE3 836 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 OR8I2Q8N0Y5 310 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 KIR2DL5AQ8N109 375 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 STXBP6Q8NFX7 210 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 OR4D5Q8NGN0 318 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 KIR2DL5BQ8NHK3 375 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 TM2D3Q9BRN9 247 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 MARVELD1Q9BSK0 173 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 TMEM147Q9BVK8 224 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 NMES1Q9C002 83 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 MS4A6AQ9H2W1 248 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 MRPL36Q9P0J6 103 aaKnown RBP2.72□□□□□ -1.97
NUP88-202ENST00000570937 TBC1D24Q9ULP9 559 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 LSM5Q9Y4Y9 91 aaKnown RBP2.72□□□□□ -1.97
NUP88-202ENST00000570937 TGP01266 2768 aa2.72□□□□□ -1.97
NUP88-202ENST00000570937 SORL1Q92673 2214 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 IGKV3-7A0A075B6H7 116 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 C7orf66A4D0T2 115 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 RBMY1BA6NDE4 496 aaKnown RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 RBMY1EA6NEQ0 496 aaKnown RBP2.71□□□□□ -1.98
NUP88-202ENST00000570937 F8W036 122 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 C3orf84H3BNL1 204 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 H3BP45 60 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 K7EPK0 472 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 GOSR2O14653 212 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 MPDU1O75352 247 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 HYPMO75409 117 aa2.71□□□□□ -1.98
NUP88-202ENST00000570937 DEDDO75618 318 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms