RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 LINC01587Q99440 93 aa9.54□□□□□ -0.88
RPAIN-207ENST00000570883 C20orf144Q9BQM9 153 aa9.54□□□□□ -0.88
RPAIN-207ENST00000570883 NIPSNAP3BQ9BS92 247 aa9.54□□□□□ -0.88
RPAIN-207ENST00000570883 Q9H3A6 140 aa9.54□□□□□ -0.88
RPAIN-207ENST00000570883 APLNQ9ULZ1 77 aa9.54□□□□□ -0.88
RPAIN-207ENST00000570883 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
RPAIN-207ENST00000570883 IGHV4-4A0A075B6R2 117 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 TEX48A0A1B0GUV7 120 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 A0A1W2PPV4 95 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 KLLNB2CW77 178 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 H7BYZ3 331 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 HTN1P15515 57 aa9.53□□□□□ -0.88
RPAIN-207ENST00000570883 RNASE8Q8TDE3 154 aaKnown RBP9.53□□□□□ -0.88
RPAIN-207ENST00000570883 TRAV12-3A0A0B4J271 114 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 ARPC5O15511 151 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 ARL14EPLP0DKL9 152 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 CRISP2P16562 243 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 CDC34P49427 236 aaPredicted RBP9.52□□□□□ -0.89
RPAIN-207ENST00000570883 CD300CQ08708 224 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 PRR9Q5T870 116 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 PQLC2Q6ZP29 291 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 LYPD1Q8N2G4 141 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 ZFAND2AQ8N6M9 145 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 Q8TAT8 98 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 C16orf74Q96GX8 76 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 LINC00477Q96M19 166 aa9.52□□□□□ -0.89
RPAIN-207ENST00000570883 SLC25A5P05141 298 aaKnown RBP9.51□□□□□ -0.89
RPAIN-207ENST00000570883 TCTAP57738 103 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 SERF2P84101 59 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 LGALS9CQ6DKI2 356 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 SSX7Q7RTT5 188 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 TMEM263Q8WUH6 116 aaKnown RBP9.51□□□□□ -0.89
RPAIN-207ENST00000570883 RAB24Q969Q5 203 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF492Q9P255 531 aa9.51□□□□□ -0.89
RPAIN-207ENST00000570883 BORCS7-ASMTA0A0B4J1R7 106 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 A0A1B0GVG6 124 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 C7orf71A4D174 169 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 LYRM9A8MSI8 78 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 DIRC3C9JPN6 131 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF324O75467 553 aaPredicted RBP9.5□□□□□ -0.89
RPAIN-207ENST00000570883 STAG3L2P0CL84 134 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 STAG3L3P0CL85 134 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 DAD1P61803 113 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 TMEM78Q5T7P6 136 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 Q6ZQT7 251 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 OR11H4Q8NGC9 324 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 OTORQ9NRC9 128 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 CYTL1Q9NRR1 136 aa9.5□□□□□ -0.89
RPAIN-207ENST00000570883 NACAE9PAV3 2078 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 NMBP08949 121 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 HTN3P15516 51 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 GCHFRP30047 84 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF138P52744 262 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF726P1Q15940 193 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF493Q6ZR52 646 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 GNPNAT1Q96EK6 184 aaPredicted RBP9.49□□□□□ -0.89
RPAIN-207ENST00000570883 HYLS1Q96M11 299 aa9.49□□□□□ -0.89
RPAIN-207ENST00000570883 MUC4Q99102 2169 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 hCG_2014768A0A024R1R8 64 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 PGPA6NDG6 321 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 MBP02144 154 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 DEFB130BP0DP73 79 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 DEFB130AP0DP74 79 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 RNASE4P34096 147 aaKnown RBP9.48□□□□□ -0.89
RPAIN-207ENST00000570883 CSN1S1P47710 185 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 SUN5Q8TC36 379 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 PYGO2Q9BRQ0 406 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 NOP10Q9NPE3 64 aaKnown RBP9.48□□□□□ -0.89
RPAIN-207ENST00000570883 RPH3ALQ9UNE2 315 aa9.48□□□□□ -0.89
RPAIN-207ENST00000570883 DNAH10Q8IVF4 4471 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 TRBV7-9A0A0J9YWB2 115 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 TAAR5O14804 337 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 GPX1P07203 203 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 GNG5P63218 68 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 ZNF345Q14585 488 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 KCNRGQ8N5I3 272 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 C11orf72Q8NBR9 251 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 RXFP4Q8TDU9 374 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 LINC00467Q9BRT7 94 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 NDUFAF3Q9BU61 184 aa9.47□□□□□ -0.89
RPAIN-207ENST00000570883 ACTR3CQ9C0K3 210 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-207ENST00000570883 TIMM8BQ9Y5J9 83 aaPredicted RBP9.47□□□□□ -0.89
RPAIN-207ENST00000570883 GOLT1AQ6ZVE7 132 aa9.46□□□□□ -0.9
RPAIN-207ENST00000570883 CCDC28AQ8IWP9 274 aa9.46□□□□□ -0.9
RPAIN-207ENST00000570883 LINC00612Q8N6U2 182 aa9.46□□□□□ -0.9
RPAIN-207ENST00000570883 CMTM2Q8TAZ6 248 aa9.46□□□□□ -0.9
RPAIN-207ENST00000570883 FRAS1Q86XX4 4008 aa9.46□□□□□ -0.9
RPAIN-207ENST00000570883 TRAV8-1A0A0A6YYK1 113 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 HMSDA8MTL9 139 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 CXorf1O96002 111 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 TMEM88Q6PEY1 159 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 TMED6Q8WW62 240 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 ST6GAL2Q96JF0 529 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
RPAIN-207ENST00000570883 CTXND1A0A1B0GTU2 59 aa9.44□□□□□ -0.9
RPAIN-207ENST00000570883 ANXA2RQ3ZCQ2 193 aa9.44□□□□□ -0.9
RPAIN-207ENST00000570883 FAM74A1Q5RGS3 127 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms