RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 LINC00477Q96M19 166 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 VGLL1Q99990 258 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 MRPL32Q9BYC8 188 aaKnown RBP3.8□□□□□ -1.8
CHD3-212ENST00000570758 KCNIP2Q9NS61 270 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 TIMM8BQ9Y5J9 83 aaPredicted RBP3.8□□□□□ -1.8
CHD3-212ENST00000570758 FAT2Q9NYQ8 4349 aa3.8□□□□□ -1.8
CHD3-212ENST00000570758 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 GAGE12BA1L429 117 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 C7orf71A4D174 169 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 KLLNB2CW77 178 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 RTL8CO15255 209 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 OR7C2O60412 319 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 ZNF324O75467 553 aaPredicted RBP3.79□□□□□ -1.8
CHD3-212ENST00000570758 GAGE7O76087 117 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 PTTG1O95997 202 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 IFNA5P01569 189 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 SLC25A5P05141 298 aaKnown RBP3.79□□□□□ -1.8
CHD3-212ENST00000570758 ATP5G1P05496 136 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 GAGE12FP0CL80 117 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 GAGE12GP0CL81 117 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 GAGE12IP0CL82 117 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 CRISP2P16562 243 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 RNASE4P34096 147 aaKnown RBP3.79□□□□□ -1.8
CHD3-212ENST00000570758 ATP5G3P48201 142 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 RAB2AP61019 212 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
CHD3-212ENST00000570758 Q5BKY6 102 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 ZNF493Q6ZR52 646 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 UBE2DNLQ8IWF7 75 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 CCDC28AQ8IWP9 274 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 ZFAND2AQ8N6M9 145 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 LINC00612Q8N6U2 182 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 SCGB1C1Q8TD33 95 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 Q9H3A6 140 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 AAMDCQ9H7C9 122 aa3.79□□□□□ -1.8
CHD3-212ENST00000570758 DYNC1H1Q14204 4646 aaKnown RBP3.79□□□□□ -1.8
CHD3-212ENST00000570758 HMGB3O15347 200 aaKnown RBP3.78□□□□□ -1.8
CHD3-212ENST00000570758 NUDT3O95989 172 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 HOXA5P20719 270 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 ZNF138P52744 262 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 RANP62826 216 aaKnown RBP3.78□□□□□ -1.8
CHD3-212ENST00000570758 DAZ2Q13117 558 aaKnown RBP3.78□□□□□ -1.8
CHD3-212ENST00000570758 LGALS9BQ3B8N2 356 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 ACOT6Q3I5F7 207 aaPredicted RBP3.78□□□□□ -1.8
CHD3-212ENST00000570758 RNF212Q495C1 297 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 KHDC3LQ587J8 217 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 TMEM78Q5T7P6 136 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 Q6ZR54 194 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 Q6ZTI0 123 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 C15orf53Q8NAA6 179 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 C11orf72Q8NBR9 251 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 Q8TAT8 98 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 LINC00467Q9BRT7 94 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 MED28Q9H204 178 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 TMPRSS5Q9H3S3 457 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 GSN-AS1Q9NRJ2 163 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 ZNF492Q9P255 531 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 TP53TG3Q9ULZ0 132 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 KLF12Q9Y4X4 402 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 NACAE9PAV3 2078 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 HECTD4Q9Y4D8 3996 aa3.78□□□□□ -1.8
CHD3-212ENST00000570758 A0A0J9YY99 117 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 A0A1B0GVY2 172 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 RBAKDNA6NC62 111 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 PGPA6NDG6 321 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 SNURFLB1AK76 121 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 DIRC3C9JPN6 131 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 GPX1P07203 203 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 NMBP08949 121 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 M6PRP20645 277 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 TAS2R45P59539 299 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 OR5I1Q13606 314 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 ANXA2RQ3ZCQ2 193 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 LINC00336Q6ZUF6 198 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 LYPD1Q8N2G4 141 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 EIF4E3Q8N5X7 224 aaKnown RBP3.77□□□□□ -1.81
CHD3-212ENST00000570758 HSD17B11Q8NBQ5 300 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 ZNRF2Q8NHG8 242 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 HYLS1Q96M11 299 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 AQP10Q96PS8 301 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 LINC00588Q9Y4M8 146 aa3.77□□□□□ -1.81
CHD3-212ENST00000570758 DNAH11Q96DT5 4516 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 IGHV1OR15-1A0A075B7D0 117 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 TRAV26-1A0A087WT03 109 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 TRGV1A0A0A0MS02 117 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 TRBV7-9A0A0J9YWB2 115 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 A0A1W2PPV4 95 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 PRSS29PA6NIE9 313 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 G3V3Q6 166 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 RGS13O14921 159 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 SPINK4O60575 86 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 GIPP09681 153 aaPredicted RBP3.76□□□□□ -1.81
CHD3-212ENST00000570758 ARL14EPLP0DKL9 152 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 ATP6V0CP27449 155 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 CSN1S1P47710 185 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 TCL1AP56279 114 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 GNG5P63218 68 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 ZNF266Q14584 549 aa3.76□□□□□ -1.81
CHD3-212ENST00000570758 MUC21Q5SSG8 566 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms