RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 ST6GAL2Q96JF0 529 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 BCL7BQ9BQE9 202 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 AGPAT4-IT1Q9H0P7 198 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 DNAJC4Q9NNZ3 241 aa8.18□□□□□ -1.1
CAPN3-220ENST00000569827 LSM5Q9Y4Y9 91 aaKnown RBP8.18□□□□□ -1.1
CAPN3-220ENST00000569827 UBE2L5PA0A1B0GUS4 154 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 KLLNB2CW77 178 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 E5RGE8 158 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 NDUFB4O95168 129 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 IFNA5P01569 189 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 BCAP31P51572 246 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 CRYBA4P53673 196 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 C18orf15Q96N68 181 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 SRRQ9GZT4 340 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
CAPN3-220ENST00000569827 FAM24AA6NFZ4 105 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 MPDU1O75352 247 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 GPX1P07203 203 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 BTCP35070 178 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 BAXQ07812 192 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 FHL2Q14192 279 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 GCSAMLQ5JQS6 135 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 MUC21Q5SSG8 566 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 Q6ZRG5 221 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 Q8TAT8 98 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 FAM19A4Q96LR4 140 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 VGLL1Q99990 258 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 LINC00467Q9BRT7 94 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 LY96Q9Y6Y9 160 aa8.16□□□□□ -1.1
CAPN3-220ENST00000569827 TRBV19A0A075B6N1 114 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 FAM25EA8MYX2 175 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 L7N2F9 121 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 RGS13O14921 159 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 GCSHP23434 173 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 S100A5P33763 92 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 INPP1P49441 399 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 CAV2P51636 162 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 TAS2R30P59541 319 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 VAMP2P63027 116 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 ZNF415Q09FC8 603 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 ANXA2RQ3ZCQ2 193 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 TRIQKQ629K1 86 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 FAM122CQ6P4D5 195 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 ZFAND2AQ8N6M9 145 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 SLC39A9Q9NUM3 307 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 MSRB1Q9NZV6 116 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 PRO0255Q9UI72 69 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 HHLA3Q9XRX5 114 aa8.15□□□□□ -1.1
CAPN3-220ENST00000569827 LRP1Q07954 4544 aaKnown RBP8.15□□□□□ -1.1
CAPN3-220ENST00000569827 IGHV1OR15-1A0A075B7D0 117 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 CCDC160A6NGH7 325 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 K7EQD1 137 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 MRPL23Q16540 153 aaKnown RBP8.14□□□□□ -1.11
CAPN3-220ENST00000569827 GUK1Q16774 197 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 NEGR1Q7Z3B1 354 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 NFE4Q86UQ8 179 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 OR1L4Q8NGR5 311 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 ZNF479Q96JC4 524 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 ARPC5LQ9BPX5 153 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 GGACTQ9BVM4 153 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 UQCC1Q9NVA1 299 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 WDR83OSQ9Y284 106 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 TIMM9Q9Y5J7 89 aa8.14□□□□□ -1.11
CAPN3-220ENST00000569827 TRGV4A0A0C4DH28 118 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 IGSF23A1L1A6 192 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 GYPEP15421 78 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 CRISP2P16562 243 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 FGF7P21781 194 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 SRIP30626 198 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 IBA57Q5T440 356 aaKnown RBP8.13□□□□□ -1.11
CAPN3-220ENST00000569827 Q6ZSN1 163 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 DEDD2Q8WXF8 326 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 MRPL53Q96EL3 112 aaKnown RBP8.13□□□□□ -1.11
CAPN3-220ENST00000569827 LINC00477Q96M19 166 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 PFDN5Q99471 154 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 SDHCQ99643 169 aaPredicted RBP8.13□□□□□ -1.11
CAPN3-220ENST00000569827 C11orf1Q9H5F2 150 aa8.13□□□□□ -1.11
CAPN3-220ENST00000569827 IGLV5-52A0A0A0MRZ9 124 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 ZNF253O75346 499 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 CRYGDP07320 174 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 HIST1H1EP10412 219 aaKnown RBP8.12□□□□□ -1.11
CAPN3-220ENST00000569827 S100A10P60903 97 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 RAB31Q13636 194 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 C9orf47Q6ZRZ4 202 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 MIR17HGQ75NE6 70 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 MITD1Q8WV92 249 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 SEC22CQ9BRL7 303 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 SLC25A2Q9BXI2 301 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
CAPN3-220ENST00000569827 TRAV6A0A075B6T7 132 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 NAP1L6A6NFF2 107 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 FAM229AH3BQW9 127 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 J3QL48 77 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 OR10J4P0C629 311 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 EVI2AP22794 236 aa8.11□□□□□ -1.11
CAPN3-220ENST00000569827 RPL29P47914 159 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms