RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 NDUFA4O00483 81 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 TRGV3P03979 118 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 SRIP30626 198 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 BMI1P35226 326 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 BLCAPP62952 87 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 HBBP68871 147 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 CTAG1AP78358 180 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 SLC35B1P78383 322 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 SLAQ13239 276 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 IQCJQ1A5X6 159 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 DEFB113Q30KQ7 82 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 KIAA1644Q3SXP7 199 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 HIST2H2BCQ6DN03 193 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF493Q6ZR52 646 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 TCF24Q7RTU0 167 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF575Q86XF7 245 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 C18orf32Q8TCD1 76 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 PGLYRP4Q96LB8 373 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
SF3B3-213ENST00000569687 RPH3ALQ9UNE2 315 aa4.13□□□□□ -1.75
SF3B3-213ENST00000569687 ZFHX3Q15911 3703 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF469Q96JG9 3925 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-213ENST00000569687 LOC102724200A0A096LPH7 203 aaPredicted RBP4.12□□□□□ -1.75
SF3B3-213ENST00000569687 TRAV8-2A0A0B4J237 113 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 A0A1B0GUS0 222 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 A0A1B0GUT8 65 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 TMEM189A5PLL7 270 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 FABP5P3A8MUU1 101 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 LINC00587B1AMM8 73 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 SH2D1AO60880 128 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 CT45A10P0DMU9 189 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 GYPEP15421 78 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 ARL3P36405 182 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 CAMPP49913 170 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 LY6EQ16553 131 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 C9orf152Q5JTZ5 239 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 C9orf47Q6ZRZ4 202 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 Q6ZWC4 215 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 GPHB5Q86YW7 130 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 SIGLECL1Q8N7X8 197 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 GLMPQ8WWB7 406 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 VGLL1Q99990 258 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 KLK15Q9H2R5 256 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 NAGKQ9UJ70 344 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 LENEPQ9Y5L5 61 aa4.12□□□□□ -1.75
SF3B3-213ENST00000569687 USP9YO00507 2555 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 AKAP6Q13023 2319 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ABCA2Q9BZC7 2435 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 IGKV2-40A0A087WW87 121 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 TRBV7-9A0A0J9YWB2 115 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF705FA8MVS1 300 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 PRAC2D3DTV9 90 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 F2Z2F3 143 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 WIPF1O43516 503 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF324O75467 553 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 TGFAP01135 160 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 IGKV2D-40P01614 121 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 IGLC6P0CF74 106 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 RAB4AP20338 218 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 PMCHP20382 165 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF138P52744 262 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 HIST1H1AQ02539 215 aaPredicted RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 FOXE3Q13461 319 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 DEFB112Q30KQ8 113 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 Q5PR19 223 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 Q6YL49 198 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 NIT1Q86X76 327 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 OR4X2Q8NGF9 303 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 CHCHD1Q96BP2 118 aaKnown RBP4.11□□□□□ -1.75
SF3B3-213ENST00000569687 KCNS1Q96KK3 526 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 LINC00477Q96M19 166 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 C8orf49Q96NF6 230 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 ASCL2Q99929 193 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 CNFNQ9BYD5 112 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 SAMD10Q9BYL1 202 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 AGPAT4-IT1Q9H0P7 198 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 NRN1Q9NPD7 142 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 LINC00527Q9UJ94 153 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 U3KQK5 164 aa4.11□□□□□ -1.75
SF3B3-213ENST00000569687 SPG11Q96JI7 2443 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV3-35A0A0C4DH35 117 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV7-4-1A0A0J9YVY3 117 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 SOCS3O14543 225 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 OVOL1O14753 267 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV4-59P01825 116 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 OR5AL1P0C617 328 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 LINC00614P0C842 121 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 IGHV4-31P0DP07 118 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 PSMB8P28062 276 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 HLA-DMBP28068 263 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 CTRLP40313 264 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 AMTP48728 403 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 ZNF80P51504 273 aaPredicted RBP4.1□□□□□ -1.75
SF3B3-213ENST00000569687 FAM106AQ4KMX7 169 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 SAMD13Q5VXD3 122 aa4.1□□□□□ -1.75
SF3B3-213ENST00000569687 IGFL4Q6B9Z1 124 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms