RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 AAMDCQ9H7C9 122 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 ARMS2P0C7Q2 107 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 FAM110DQ8TAY7 271 aaPredicted RBP6.85□□□□□ -1.31
LINC00558-201ENST00000569422 PKD1L2Q7Z442 2459 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 IGLV11-55A0A075B6I3 123 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV7-81A0A0B4J1V7 117 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 IGLC2P0DOY2 106 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 SAA4P35542 130 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 PRSS22Q9GZN4 317 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 MEGF9Q9H1U4 602 aa6.85□□□□□ -1.31
LINC00558-201ENST00000569422 F8W735 103 aaPredicted RBP6.84□□□□□ -1.31
LINC00558-201ENST00000569422 C15orf32Q32M92 178 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 EBLN2Q6P2I7 272 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 LINC00173Q6ZV60 143 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 Q8N976 141 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 MRAPQ8TCY5 172 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 THYN1Q9P016 225 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 TMEM14CQ9P0S9 112 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 SELENOKQ9Y6D0 94 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 CACNA1AO00555 2505 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 IGHV2-70DA0A0C4DH43 119 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 A0A1B0GXF2 115 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 FAM106CPP0CH98 169 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 CT45A10P0DMU9 189 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 CSN1S1P47710 185 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 CRIP1P50238 77 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 BRD3OSQ6XYD6 125 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 OR4C5Q8NGB2 326 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 WIPF2Q8TF74 440 aaPredicted RBP6.84□□□□□ -1.31
LINC00558-201ENST00000569422 CSMD2Q7Z408 3487 aa6.84□□□□□ -1.31
LINC00558-201ENST00000569422 LOC389332A0A1B0GUA5 103 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 FAM181BA6NEQ2 426 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 TFPI2P48307 235 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 Q8N9W7 124 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 PMCHL2Q9BQD1 86 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.83□□□□□ -1.32
LINC00558-201ENST00000569422 NPIPB5A8MRT5 1133 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 CTSGP08311 255 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 C4orf48Q5BLP8 95 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 CLEC19AQ6UXS0 136 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 C1RLQ9NZP8 487 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 WI2-2373I1.2A0A1W2PRP0 233 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 EGR2P11161 476 aaPredicted RBP6.83□□□□□ -1.32
LINC00558-201ENST00000569422 FXYD7P58549 80 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 RHOGP84095 191 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 COL5A1-AS1Q5SY13 56 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 RASL11AQ6T310 242 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 Q6ZN92 141 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 DTX2Q86UW9 622 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 RNF182Q8N6D2 247 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 TMEM75Q8N9X5 138 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 URB1-AS1Q96HZ7 61 aa6.83□□□□□ -1.32
LINC00558-201ENST00000569422 TRAV30A0A087WSZ9 112 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 EFNA4P52798 201 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 PIP4P2Q8N4L2 257 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 TTC9CQ8N5M4 171 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 VGLL1Q99990 258 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 ZNF492Q9P255 531 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 RABAC1Q9UI14 185 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 SOX21Q9Y651 276 aaPredicted RBP6.82□□□□□ -1.32
LINC00558-201ENST00000569422 ZFYVE26Q68DK2 2539 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 A0A1B0GUT8 65 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 ERCC8Q13216 396 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 SPATA12Q7Z6I5 190 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 OR4B1Q8NGF8 309 aa6.82□□□□□ -1.32
LINC00558-201ENST00000569422 SMIM9A6NGZ8 99 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 PPIFP30405 207 aaKnown RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 TCTAP57738 103 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 PAX2Q02962 417 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 LY6EQ16553 131 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 ITLN2Q8WWU7 325 aaPredicted RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 C20orf144Q9BQM9 153 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 MRPS12O15235 138 aaKnown RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 LYZL1Q6UWQ5 148 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 PPDPFQ9H3Y8 114 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 CRYBG3Q68DQ2 2970 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 LOC102724200A0A096LPH7 203 aaPredicted RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 IGHV1-24A0A0C4DH33 117 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 TMEM189A5PLL7 270 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 LEPROTL1O95214 131 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 RPL7P18124 248 aaKnown RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 MINOS1Q5TGZ0 78 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 MRAP2Q96G30 205 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 BEX4Q9NWD9 120 aaPredicted RBP6.81□□□□□ -1.32
LINC00558-201ENST00000569422 SMAD5-AS1Q9Y6J3 95 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 MINOS1-NBL1R4GNA1 71 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 CENPEQ02224 2701 aa6.81□□□□□ -1.32
LINC00558-201ENST00000569422 F5H768 121 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 SH2D1AO60880 128 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 APOHP02749 345 aaPredicted RBP6.8□□□□□ -1.32
LINC00558-201ENST00000569422 ORM1P02763 201 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 UBE2E1P51965 193 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 HNRNPA3P51991 378 aaKnown RBP6.8□□□□□ -1.32
LINC00558-201ENST00000569422 LMO4P61968 165 aa6.8□□□□□ -1.32
LINC00558-201ENST00000569422 KLF5Q13887 457 aaPredicted RBP6.8□□□□□ -1.32
LINC00558-201ENST00000569422 Q8N6K4 173 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms