RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 DNAH1Q9P2D7 4330 aa11.8□□□□□ -0.52
USB1-215ENST00000569252 RBAKDNA6NC62 111 aa11.8□□□□□ -0.52
USB1-215ENST00000569252 C11orf94C9JXX5 98 aa11.8□□□□□ -0.52
USB1-215ENST00000569252 PMS2P11Q13670 270 aa11.8□□□□□ -0.52
USB1-215ENST00000569252 GOLT1AQ6ZVE7 132 aa11.8□□□□□ -0.52
USB1-215ENST00000569252 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
USB1-215ENST00000569252 FBLL1A6NHQ2 334 aaKnown RBP11.79□□□□□ -0.52
USB1-215ENST00000569252 GGTLC3B5MD39 225 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 CA1P00915 261 aaPredicted RBP11.79□□□□□ -0.52
USB1-215ENST00000569252 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
USB1-215ENST00000569252 AMBPP02760 352 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 TCRAP04437 139 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 PRB4P10163 310 aaPredicted RBP11.79□□□□□ -0.52
USB1-215ENST00000569252 HAGHQ16775 308 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 C9orf47Q6ZRZ4 202 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 CYB561D1Q8N8Q1 229 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 ATG101Q9BSB4 218 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 ZMAT4Q9H898 229 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 VAX2Q9UIW0 290 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 U3KQK5 164 aa11.79□□□□□ -0.52
USB1-215ENST00000569252 NPIPB6E9PJ23 425 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 LEPP41159 167 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 ZNF138P52744 262 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 GNG5P63218 68 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 ERCC8Q13216 396 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 LINC00322Q6ZN03 302 aaPredicted RBP11.78□□□□□ -0.52
USB1-215ENST00000569252 NDFIP1Q9BT67 221 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 EIF5A2Q9GZV4 153 aaKnown RBP11.78□□□□□ -0.52
USB1-215ENST00000569252 AGPAT4-IT1Q9H0P7 198 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 STARD9Q9P2P6 4700 aa11.78□□□□□ -0.52
USB1-215ENST00000569252 RBFOX3A6NFN3 312 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 PEX7O00628 323 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 PDE6DO43924 150 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 BCL2P10415 239 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 ATP5G3P48201 142 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 FXYD7P58549 80 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 LYPD6BQ8NI32 183 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 VGLL1Q99990 258 aa11.77□□□□□ -0.53
USB1-215ENST00000569252 S100A9P06702 114 aaKnown RBP11.76□□□□□ -0.53
USB1-215ENST00000569252 CT45A10P0DMU9 189 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 CDKN1BP46527 198 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 UBE2G1P62253 170 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 MEF2BQ02080 365 aaPredicted RBP11.76□□□□□ -0.53
USB1-215ENST00000569252 CCDC28AQ8IWP9 274 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 PCNPQ8WW12 178 aaKnown RBP11.76□□□□□ -0.53
USB1-215ENST00000569252 RCHY1Q96PM5 261 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 LYSTQ99698 3801 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 SLC35B3Q9H1N7 401 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 ZNF492Q9P255 531 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 XCL2Q9UBD3 114 aa11.76□□□□□ -0.53
USB1-215ENST00000569252 GPX1P07203 203 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 NHLRC4P0CG21 123 aaPredicted RBP11.75□□□□□ -0.53
USB1-215ENST00000569252 AKR1C3P42330 323 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 SPINK13Q1W4C9 94 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 Q6ZWC4 215 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 TMEM208Q9BTX3 173 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 LENEPQ9Y5L5 61 aa11.75□□□□□ -0.53
USB1-215ENST00000569252 A8MTW9 85 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 NMBP08949 121 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 FLI1Q01543 452 aaPredicted RBP11.74□□□□□ -0.53
USB1-215ENST00000569252 SAPCD1Q5SSQ6 148 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 PRNTQ86SH4 94 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 TMEM75Q8N9X5 138 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 FMC1Q96HJ9 113 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 SPATA25Q9BR10 227 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 PSG8Q9UQ74 426 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 GOLT1BQ9Y3E0 138 aa11.74□□□□□ -0.53
USB1-215ENST00000569252 TRBV7-9A0A0J9YWB2 115 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 LOC102723971A0A1B0GUV8 181 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 J3KRW8 73 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 M0R2Z0 102 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 SPRY2O43597 315 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 INSP01308 110 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 PEA15Q15121 130 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 RARRES2Q99969 163 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 TREM1Q9NP99 234 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 MED9Q9NWA0 146 aa11.73□□□□□ -0.53
USB1-215ENST00000569252 TRAV8-1A0A0A6YYK1 113 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 RNASE4P34096 147 aaKnown RBP11.72□□□□□ -0.53
USB1-215ENST00000569252 IFITM2Q01629 132 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 DEFB135Q30KP9 77 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 TOR2AQ5JU69 321 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 CLLU1Q5K131 121 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 AMTNQ6UX39 209 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 IGF2BP2-AS1Q96M15 143 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 LINC00479Q96M42 142 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 FAM210AQ96ND0 272 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
USB1-215ENST00000569252 CSMD3Q7Z407 3707 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 TRAV12-2A0A075B6T6 113 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 TRAV34A0A0B4J273 112 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 TMEM183BQ1AE95 376 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 ZNF506Q5JVG8 444 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 Q8TAT8 98 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 TP53TG1Q9Y2A0 90 aa11.71□□□□□ -0.53
USB1-215ENST00000569252 ZFP30Q9Y2G7 519 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms