RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 FFAR4Q5NUL3 377 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 LYPD1Q8N2G4 141 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 TMEM256Q8N2U0 113 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 PHLDA1Q8WV24 401 aaPredicted RBP6.62□□□□□ -1.35
CAPN3-219ENST00000569136 FAM167A-AS1Q96KT0 104 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 TMEM208Q9BTX3 173 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 PAXXQ9BUH6 204 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 AAMDCQ9H7C9 122 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 WFDC1Q9HC57 220 aa6.62□□□□□ -1.35
CAPN3-219ENST00000569136 BORCS7-ASMTA0A0B4J1R7 106 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 A0A1W2PPV4 95 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 BOLA2-SMG1P6H3BVE0 249 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 DEFB4AO15263 64 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 INSP01308 110 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 SNRPCP09234 159 aaKnown RBP6.61□□□□□ -1.35
CAPN3-219ENST00000569136 M6PRP20645 277 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 HLA-DMBP28068 263 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 CDKN1BP46527 198 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 FXYD7P58549 80 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 NANOS2P60321 138 aaKnown RBP6.61□□□□□ -1.35
CAPN3-219ENST00000569136 SERF2P84101 59 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 RRN3P1Q2M238 152 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 MIR17HGQ75NE6 70 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 OR2T35Q8NGX2 323 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 ODF3Q96PU9 254 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 C20orf144Q9BQM9 153 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 SLC25A2Q9BXI2 301 aa6.61□□□□□ -1.35
CAPN3-219ENST00000569136 IGHV3OR16-12A0A075B7B8 117 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 LCE6AA0A183 80 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 H3BTX0 84 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 SLC17A3O00476 420 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 TAAR5O14804 337 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 NDUFB4O95168 129 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 NUDT3O95989 172 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 NMBP08949 121 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 CSN1S1P47710 185 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 TAS2R60P59551 318 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 PMS2P11Q13670 270 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 SPINK13Q1W4C9 94 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 KHDC3LQ587J8 217 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 Q5BKY6 102 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 PQLC2Q6ZP29 291 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 C1orf158Q8N1D5 194 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 RXFP4Q8TDU9 374 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 C2CD4CQ8TF44 421 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 BLNKQ8WV28 456 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 GNPNAT1Q96EK6 184 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-219ENST00000569136 LINC01587Q99440 93 aa6.6□□□□□ -1.35
CAPN3-219ENST00000569136 PSMG3Q9BT73 122 aaPredicted RBP6.6□□□□□ -1.35
CAPN3-219ENST00000569136 KMT2CQ8NEZ4 4911 aaKnown RBP6.6□□□□□ -1.35
CAPN3-219ENST00000569136 LOC102723971A0A1B0GUV8 181 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 A0A1B0GVG6 124 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 H7BYZ3 331 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 M0R2Z0 102 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 CRXO43186 299 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-219ENST00000569136 OR7C2O60412 319 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 PYYP10082 97 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 LEPP41159 167 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 ZNF493Q6ZR52 646 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.35
CAPN3-219ENST00000569136 ARL6IP6Q8N6S5 226 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 OR10G4Q8NGN3 311 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 OR10G9Q8NGN4 311 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 OR10G7Q8NGN6 311 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 OR2G3Q8NGZ4 309 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 FXYD5Q96DB9 178 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 TNFSF18Q9UNG2 199 aa6.59□□□□□ -1.35
CAPN3-219ENST00000569136 FXYD6-FXYD2A0A087WZ82 144 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 TRBV7-9A0A0J9YWB2 115 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 PRAC2D3DTV9 90 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 CT45A10P0DMU9 189 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 RANP62826 216 aaKnown RBP6.58□□□□□ -1.36
CAPN3-219ENST00000569136 C12orf74Q32Q52 190 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 FAM74A1Q5RGS3 127 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 C9orf47Q6ZRZ4 202 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 CCDC28AQ8IWP9 274 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 FAM210BQ96KR6 192 aa6.58□□□□□ -1.36
CAPN3-219ENST00000569136 TRAV12-2A0A075B6T6 113 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 RBAKDNA6NC62 111 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 LYRM9A8MSI8 78 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 ATP6V1G1O75348 118 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 SLC25A5P05141 298 aaKnown RBP6.57□□□□□ -1.36
CAPN3-219ENST00000569136 OR10J4P0C629 311 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 EMP1P54849 157 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 TMEM78Q5T7P6 136 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 EXOC3-AS1Q8N2X6 119 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 HSD17B11Q8NBQ5 300 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 NIPSNAP3BQ9BS92 247 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 AGPAT4-IT1Q9H0P7 198 aa6.57□□□□□ -1.36
CAPN3-219ENST00000569136 DEFB131BA0A096LNP1 70 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 RNF222A6NCQ9 220 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 HMSDA8MTL9 139 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 ZNF705GA8MUZ8 300 aaPredicted RBP6.56□□□□□ -1.36
CAPN3-219ENST00000569136 M0R3E3 92 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 ATP6V0CP27449 155 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 UBE2L3P68036 154 aaKnown RBP6.56□□□□□ -1.36
CAPN3-219ENST00000569136 FAM122CQ6P4D5 195 aa6.56□□□□□ -1.36
CAPN3-219ENST00000569136 BAP18Q8IXM2 172 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms