RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 FAM231DQ6ZW35 169 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 OR2D3Q8NGH3 330 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 DPF1Q92782 380 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 RPP21Q9H633 154 aaKnown RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 UFC1Q9Y3C8 167 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 TRAV8-2A0A0B4J237 113 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 SERTM2A0A1B0GWG4 89 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 A0A1W2PRX2 142 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 HIGD1CA8MV81 97 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 GZMBP10144 247 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 CBLN1P23435 193 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 RPL19P84098 196 aaKnown RBP5.38□□□□□ -1.55
SMG1-215ENST00000568239 TCF24Q7RTU0 167 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 ZNF738Q8NE65 137 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 KLHL30-AS1Q8NEE0 82 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 OR11H1Q8NG94 326 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 SMPXQ9UHP9 88 aa5.38□□□□□ -1.55
SMG1-215ENST00000568239 FN1P02751 2386 aaKnown RBP5.37□□□□□ -1.55
SMG1-215ENST00000568239 TMSB15BA0A087X1C1 80 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 SNURFLB1AK76 121 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TYMSP04818 313 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 MEOX2P50222 304 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 SLURP1P55000 103 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 SSTP61278 116 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 NEU1Q99519 415 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 NDFIP1Q9BT67 221 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TPPP3Q9BW30 176 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 NRN1Q9NPD7 142 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 SETXQ7Z333 2677 aaKnown RBP5.37□□□□□ -1.55
SMG1-215ENST00000568239 SMIM27A0A1W2PRY6 76 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 DEFB1P60022 68 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TCTEX1D4Q5JR98 221 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 SAPCD1Q5SSQ6 148 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TSKUQ8WUA8 353 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 PRR25Q96S07 402 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 GPR61Q9BZJ8 451 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 NAT8BQ9UHF3 227 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 JMJD1CQ15652 2540 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 HIVEP1P15822 2718 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TMEM213A2RRL7 107 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 A8MWL6 223 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 K7EMT4 169 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 CAMPP49913 170 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 PDZD11Q5EBL8 140 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 TMEM78Q5T7P6 136 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 NUP35Q8NFH5 326 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 MYOZ3Q8TDC0 251 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 PGLYRP4Q96LB8 373 aa5.37□□□□□ -1.55
SMG1-215ENST00000568239 C19orf71A6NCJ1 209 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 INAFM1C9JVW0 142 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 BMI1P35226 326 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 CDX1P47902 265 aaPredicted RBP5.36□□□□□ -1.55
SMG1-215ENST00000568239 CRIP1P50238 77 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 SRSF2Q01130 221 aaKnown RBP5.36□□□□□ -1.55
SMG1-215ENST00000568239 ACTL10Q5JWF8 245 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 PRR31Q5SQ13 230 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 RNF152Q8N8N0 203 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 C20orf173Q96LM9 149 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 ZNF492Q9P255 531 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 CHTOPQ9Y3Y2 248 aaKnown RBP5.36□□□□□ -1.55
SMG1-215ENST00000568239 TRAV9-1A0A075B6T8 112 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 TRBV6-1A0A0K0K1D8 114 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 IZUMO1RA6ND01 250 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 C5orf52A6NGY3 159 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 F6UB75 175 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 LINC01619G3V211 115 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
SMG1-215ENST00000568239 FAM162BQ5T6X4 162 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 AGPAT4-IT1Q9H0P7 198 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 MRPL18Q9H0U6 180 aaKnown RBP5.36□□□□□ -1.55
SMG1-215ENST00000568239 F8P00451 2351 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 C2CD3Q4AC94 2353 aa5.36□□□□□ -1.55
SMG1-215ENST00000568239 M0QZ24 198 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 HILS1P60008 231 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 OR1N2Q8NGR9 330 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 LINC01006Q8NI28 216 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 NSD1Q96L73 2696 aaPredicted RBP5.35□□□□□ -1.55
SMG1-215ENST00000568239 FBLL1A6NHQ2 334 aaKnown RBP5.35□□□□□ -1.55
SMG1-215ENST00000568239 SH2D1AO60880 128 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 ORM1P02763 201 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 CD28P10747 220 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 ZNF80P51504 273 aaPredicted RBP5.35□□□□□ -1.55
SMG1-215ENST00000568239 HIST1H1AQ02539 215 aaPredicted RBP5.35□□□□□ -1.55
SMG1-215ENST00000568239 KIAA1644Q3SXP7 199 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 OR10J6PQ8NGY7 276 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 C4orf3Q8WVX3 66 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 GTSF1Q8WW33 167 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 TMEM160Q9NX00 188 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 AGRNO00468 2067 aa5.35□□□□□ -1.55
SMG1-215ENST00000568239 XKRY2A2RUG3 117 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 TMEM189A5PLL7 270 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 C2orf70A6NJV1 201 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 PHOX2AO14813 284 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 ZNF138P52744 262 aa5.34□□□□□ -1.55
SMG1-215ENST00000568239 GFI1BQ5VTD9 330 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 203.4 ms