RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 DPF1Q92782 380 aa8.66□□□□□ -1.02
PALB2-206ENST00000568219 C17orf100A8MU93 164 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 FAM74A4Q5TZK3 123 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 C1orf162Q8NEQ5 155 aaPredicted RBP8.65□□□□□ -1.02
PALB2-206ENST00000568219 IGKV1D-37A0A075B6S9 117 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 C19orf71A6NCJ1 209 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 GP9P14770 177 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 GLMPQ8WWB7 406 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 C16orf92Q96LL3 132 aa8.65□□□□□ -1.02
PALB2-206ENST00000568219 SPTBN5Q9NRC6 3674 aaKnown RBP8.65□□□□□ -1.03
PALB2-206ENST00000568219 B5MCH6 92 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 TIMM23O14925 209 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 IGHV4-39P01824 125 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 EGR2P11161 476 aaPredicted RBP8.65□□□□□ -1.03
PALB2-206ENST00000568219 INSL3P51460 131 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 RNF182Q8N6D2 247 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 DEFB124Q8NES8 71 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
PALB2-206ENST00000568219 LAGE3Q14657 143 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 FOXI2Q6ZQN5 318 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 DLX4Q92988 240 aaPredicted RBP8.64□□□□□ -1.03
PALB2-206ENST00000568219 MRAP2Q96G30 205 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 MLST8Q9BVC4 326 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 A8MWV9 139 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 BSPH1Q075Z2 132 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 SRSF1Q07955 248 aaKnown RBP eCLIP8.64□□□□□ -1.03
PALB2-206ENST00000568219 UBALD2Q8IYN6 164 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 KLF12Q9Y4X4 402 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 NACAE9PAV3 2078 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 TRBV20-1A0A075B6N2 111 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 HLA-DRB4P13762 266 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 ZNF562Q6V9R5 426 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 HLA-DRB4X5D2U9 266 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 AGRNO00468 2067 aa8.64□□□□□ -1.03
PALB2-206ENST00000568219 APOBEC3AP31941 199 aaPredicted RBP8.63□□□□□ -1.03
PALB2-206ENST00000568219 RUSC1-AS1Q66K80 236 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 ZNF474Q6S9Z5 364 aaPredicted RBP8.63□□□□□ -1.03
PALB2-206ENST00000568219 PLSCR4Q9NRQ2 329 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 TET2Q6N021 2002 aaPredicted RBP8.63□□□□□ -1.03
PALB2-206ENST00000568219 IGHV1-8P0DP01 117 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 SHANK2-AS3Q9BTD1 123 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 GAGE2BQ13066 116 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 GAGE2EQ4V326 116 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 ASCL5Q7RTU5 278 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 GAGE2DQ9UEU5 116 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 LTBP2Q14767 1821 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 FGF6P10767 208 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 GFRALQ6UXV0 394 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 ZNF833PQ6ZTB9 187 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 THAP8Q8NA92 274 aa8.63□□□□□ -1.03
PALB2-206ENST00000568219 TLN1Q9Y490 2541 aaKnown RBP8.62□□□□□ -1.03
PALB2-206ENST00000568219 CSPG4Q6UVK1 2322 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 IGHV1-3A0A0C4DH29 117 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 SIVA1O15304 175 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 PRR25Q96S07 402 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 WNK1Q9H4A3 2382 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 REV3LO60673 3130 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 SLC25A16P16260 332 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 TIMD4Q96H15 378 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 IGKV3-20P01619 116 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
PALB2-206ENST00000568219 RPL13AP40429 203 aaKnown RBP8.62□□□□□ -1.03
PALB2-206ENST00000568219 TMEM30BQ3MIR4 351 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 NEGR1Q7Z3B1 354 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 DTX2Q86UW9 622 aa8.62□□□□□ -1.03
PALB2-206ENST00000568219 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
PALB2-206ENST00000568219 LY6HO94772 140 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 CCDC144NLQ6NUI1 221 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 RAB1BQ9H0U4 201 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 ZNF256Q9Y2P7 627 aaPredicted RBP8.61□□□□□ -1.03
PALB2-206ENST00000568219 FAM90A27PA6NNH2 459 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 C9JAW5 83 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 IGKV1-17P01599 117 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 PVRIGQ6DKI7 326 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 UFSP1Q6NVU6 142 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 CLEC19AQ6UXS0 136 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 KLHL30-AS1Q8NEE0 82 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 SMPXQ9UHP9 88 aa8.61□□□□□ -1.03
PALB2-206ENST00000568219 ARHGAP32A7KAX9 2087 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 PRSS29PA6NIE9 313 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 NDPQ00604 133 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 RRN3P1Q2M238 152 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 TMEM155Q4W5P6 130 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 LINC00527Q9UJ94 153 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 H7C1H1 209 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 GAS8-AS1O95177 125 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 NPC2P61916 151 aa8.6□□□□□ -1.03
PALB2-206ENST00000568219 SIGLEC15Q6ZMC9 328 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 IL17RELQ6ZVW7 336 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 ZNF491Q8N8L2 437 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 WDFY3Q8IZQ1 3526 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 CRIP1P50238 77 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 KLRD1Q13241 179 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 ODF1Q14990 250 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 PSMG4Q5JS54 123 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 PRADC1Q9BSG0 188 aa8.59□□□□□ -1.03
PALB2-206ENST00000568219 TMEM178BH3BS89 294 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms