RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 Q6ZTI0 123 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 ZNRF2Q8NHG8 242 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 CHAC2Q8WUX2 184 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 GNPNAT1Q96EK6 184 aaPredicted RBP8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 FAM167A-AS1Q96KT0 104 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 VGLL1Q99990 258 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 SMIM3Q9BZL3 60 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 SLC25A31Q9H0C2 315 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 GSN-AS1Q9NRJ2 163 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 RYR1P21817 5038 aa8.53□□□□□ -1.04
GTF3C1-208ENST00000567843 NBDYA0A0U1RRE5 68 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 C7orf71A4D174 169 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 A6NHS1 94 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 CCL18P55774 89 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 H2BFSP57053 126 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 PRR9Q5T870 116 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 SSX7Q7RTT5 188 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 ZNF575Q86XF7 245 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 MRPL53Q96EL3 112 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 ODF3Q96PU9 254 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 NMES1Q9C002 83 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 WDR61Q9GZS3 305 aaKnown RBP8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 TMPRSS5Q9H3S3 457 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 AAMDCQ9H7C9 122 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 LRP1BQ9NZR2 4599 aa8.52□□□□□ -1.05
GTF3C1-208ENST00000567843 SSNA1O43805 119 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 MPDU1O75352 247 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 SLC25A5P05141 298 aaKnown RBP8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 GPX1P07203 203 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 NBEAP1P0C6P0 100 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 TNP2Q05952 138 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 LINC00612Q8N6U2 182 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 Q8TAT8 98 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 PPP1R1CQ8WVI7 109 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 PHYHIPLQ96FC7 376 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 PYGO2Q9BRQ0 406 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 PAXXQ9BUH6 204 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 OR51M1Q9H341 326 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 KLF12Q9Y4X4 402 aa8.51□□□□□ -1.05
GTF3C1-208ENST00000567843 TRGV1A0A0A0MS02 117 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 PRAF2O60831 178 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 ZNF324O75467 553 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 M6PRP20645 277 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 PDE6HQ13956 83 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 FXYD5Q96DB9 178 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 FAM19A4Q96LR4 140 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 LINC00477Q96M19 166 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 PTTG2Q9NZH5 202 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 TP53TG3Q9ULZ0 132 aa8.5□□□□□ -1.05
GTF3C1-208ENST00000567843 TRGV2A0A075B6R0 118 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 KLLNB2CW77 178 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 OR7C2O60412 319 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 IGHV3-53P01767 116 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 RANP62826 216 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 CYCSP99999 105 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 FFAR4Q5NUL3 377 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 TMEM78Q5T7P6 136 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 EIF4E3Q8N5X7 224 aaKnown RBP8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 ZFAND2AQ8N6M9 145 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 C11orf72Q8NBR9 251 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 RXFP4Q8TDU9 374 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 ZNF503Q96F45 646 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 ATP5SQ99766 215 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 FUT9Q9Y231 359 aa8.49□□□□□ -1.05
GTF3C1-208ENST00000567843 MUC4Q99102 2169 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 C17orf112F2Z3M2 114 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 MPC2O95563 127 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 DAZ2Q13117 558 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 ESRGQ1W209 222 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 C9orf47Q6ZRZ4 202 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 C6orf223Q8N319 242 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 MRPL32Q9BYC8 188 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 Q9H8V8 135 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 MRPL16Q9NX20 251 aaKnown RBP8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 MBD2Q9UBB5 411 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 HSPB11Q9Y547 144 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 ABCA13Q86UQ4 5058 aa8.48□□□□□ -1.05
GTF3C1-208ENST00000567843 HSPG2P98160 4391 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 RGS13O14921 159 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 CRISP2P16562 243 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 RPL12P30050 165 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 UBE2L3P68036 154 aaKnown RBP8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 MUC21Q5SSG8 566 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 ZNF680Q8NEM1 530 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 SCGB1C1Q8TD33 95 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 VSIG2Q96IQ7 327 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 HYLS1Q96M11 299 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 KRTAP1-5Q9BYS1 174 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 WFDC1Q9HC57 220 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 KCNIP2Q9NS61 270 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 ZNF492Q9P255 531 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
GTF3C1-208ENST00000567843 IGHV1OR15-1A0A075B7D0 117 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 IFNA5P01569 189 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 ZNF138P52744 262 aa8.46□□□□□ -1.06
GTF3C1-208ENST00000567843 DEFA1P59665 94 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms