RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 TRBV19A0A075B6N1 114 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 IGKV2-40A0A087WW87 121 aaPredicted RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 LYRM9A8MSI8 78 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 EIF3GO75821 320 aaKnown RBP eCLIP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 MPC2O95563 127 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 NUDT3O95989 172 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 IFNA5P01569 189 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 IGKV2D-40P01614 121 aaPredicted RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 TAS2R60P59551 318 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 UBE2L3P68036 154 aaKnown RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 ICAM4Q14773 271 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 FFAR4Q5NUL3 377 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 CCDC28AQ8IWP9 274 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 SCGB1C1Q8TD33 95 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 SAT2Q96F10 170 aaPredicted RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 MARVELD1Q9BSK0 173 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 WDR61Q9GZS3 305 aaKnown RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 NOP10Q9NPE3 64 aaKnown RBP7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 BATF3Q9NR55 127 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 RPH3ALQ9UNE2 315 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 HSPB11Q9Y547 144 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 ALG5Q9Y673 324 aa7.17□□□□□ -1.26
GTF3C1-206ENST00000566779 SNURFLB1AK76 121 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 NPIPB6E9PJ23 425 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 H7BYZ3 331 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 CT45A10P0DMU9 189 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 HIST1H1EP10412 219 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 RPL12P30050 165 aaKnown RBP7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 POM121L12Q8N7R1 296 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 ATG101Q9BSB4 218 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 PAXXQ9BUH6 204 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 TMEM14CQ9P0S9 112 aa7.16□□□□□ -1.26
GTF3C1-206ENST00000566779 PLAC8L1A1L4L8 177 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 NDUFB4O95168 129 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 ATP5G1P05496 136 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 RNASE4P34096 147 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 ATP5G3P48201 142 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 BTN1A1Q13410 526 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 OXA1LQ15070 435 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 Q8TAT8 98 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 TMEM263Q8WUH6 116 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 PHYHIPLQ96FC7 376 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 MRPL32Q9BYC8 188 aaKnown RBP7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 OR51M1Q9H341 326 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 FUT9Q9Y231 359 aa7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 TIMM8BQ9Y5J9 83 aaPredicted RBP7.15□□□□□ -1.26
GTF3C1-206ENST00000566779 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 C7orf71A4D174 169 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 CBY3A6NI87 242 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 ZNF253O75346 499 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GAGE7O76087 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GPX1P07203 203 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GAGE12FP0CL80 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GAGE12GP0CL81 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GAGE12IP0CL82 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 OR5I1Q13606 314 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 GAGE13Q4V321 117 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 TMEM78Q5T7P6 136 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 RNASE8Q8TDE3 154 aaKnown RBP7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 FAM167A-AS1Q96KT0 104 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 VGLL1Q99990 258 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 MED28Q9H204 178 aa7.14□□□□□ -1.27
GTF3C1-206ENST00000566779 A0A0J9YY99 117 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 HMGB3O15347 200 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 NBEAP1P0C6P0 100 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 CSN1S1P47710 185 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 RANP62826 216 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 CD300CQ08708 224 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 PDE6HQ13956 83 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 KHDC3LQ587J8 217 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 FXYD5Q96DB9 178 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 MRPL53Q96EL3 112 aaKnown RBP7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 FAM210BQ96KR6 192 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 HYLS1Q96M11 299 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 C20orf144Q9BQM9 153 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 AGPAT4-IT1Q9H0P7 198 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 PRELID1Q9Y255 219 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 MUC4Q99102 2169 aa7.13□□□□□ -1.27
GTF3C1-206ENST00000566779 PTTG1O95997 202 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 SLC25A5P05141 298 aaKnown RBP7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 TAS2R45P59539 299 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 RAB2AP61019 212 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 C15orf53Q8NAA6 179 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 HSD17B11Q8NBQ5 300 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 ODF3Q96PU9 254 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 Q9H3A6 140 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 WFDC1Q9HC57 220 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 GSN-AS1Q9NRJ2 163 aa7.12□□□□□ -1.27
GTF3C1-206ENST00000566779 TRGV2A0A075B6R0 118 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 TRAV26-1A0A087WT03 109 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 TRGV1A0A0A0MS02 117 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 A0A1W2PPV4 95 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 ACOT6Q3I5F7 207 aaPredicted RBP7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 MUC21Q5SSG8 566 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 PRR9Q5T870 116 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 Q6ZTI0 123 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 PYGO2Q9BRQ0 406 aa7.11□□□□□ -1.27
GTF3C1-206ENST00000566779 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms