RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 RBAKDNA6NC62 111 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 OR2T8A6NH00 312 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 IGKV2D-40P01614 121 aaPredicted RBP13□□□□□ -0.33
CMTM3-213ENST00000566756 IFI27P40305 119 aaPredicted RBP13□□□□□ -0.33
CMTM3-213ENST00000566756 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 MPV17L2Q567V2 206 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 LGALS9CQ6DKI2 356 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 Q8N9W7 124 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 FER1L6-AS1Q8NA97 138 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 MED13LQ71F56 2210 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 A0A096LNJ9 63 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 CCL25O15444 150 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 IGHG4P01861 327 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 CLEC2AQ6UVW9 174 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 DEFB125Q8N687 156 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 OR1N2Q8NGR9 330 aa13□□□□□ -0.33
CMTM3-213ENST00000566756 TMEM213A2RRL7 107 aa12.99□□□□□ -0.33
CMTM3-213ENST00000566756 NUDT3O95989 172 aa12.99□□□□□ -0.33
CMTM3-213ENST00000566756 PAX8Q06710 450 aa12.99□□□□□ -0.33
CMTM3-213ENST00000566756 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
CMTM3-213ENST00000566756 AMN1Q8IY45 258 aa12.99□□□□□ -0.33
CMTM3-213ENST00000566756 ZNF502Q8TBZ5 544 aa12.99□□□□□ -0.33
CMTM3-213ENST00000566756 KMT2BQ9UMN6 2715 aaPredicted RBP12.99□□□□□ -0.33
CMTM3-213ENST00000566756 SPG11Q96JI7 2443 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 A0A1W2PRD5 423 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 A0A1W2PRF3 423 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 A0A1W2PRM7 423 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 PPBPP02775 128 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 DSCR9P59020 149 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 CBY1Q9Y3M2 126 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 LINC01546A6NGU7 62 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 HBDP02042 147 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 SLC50A1Q9BRV3 221 aa12.98□□□□□ -0.33
CMTM3-213ENST00000566756 FABP5P3A8MUU1 101 aa12.97□□□□□ -0.33
CMTM3-213ENST00000566756 UBE2E1P51965 193 aa12.97□□□□□ -0.33
CMTM3-213ENST00000566756 PSMG3-AS1Q96PY0 264 aa12.97□□□□□ -0.33
CMTM3-213ENST00000566756 TMSB15BA0A087X1C1 80 aa12.96□□□□□ -0.33
CMTM3-213ENST00000566756 PSMG4Q5JS54 123 aa12.96□□□□□ -0.33
CMTM3-213ENST00000566756 VGLL1Q99990 258 aa12.96□□□□□ -0.33
CMTM3-213ENST00000566756 ZFAND3Q9H8U3 227 aa12.96□□□□□ -0.33
CMTM3-213ENST00000566756 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.33
CMTM3-213ENST00000566756 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 A1L4Q6 167 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 K7EP13 123 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 TAX1BP3O14907 124 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 BUB3O43684 328 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 CD5LO43866 347 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 IGHV3-23P01764 117 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 GPR183P32249 361 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 CKS2P33552 79 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.34
CMTM3-213ENST00000566756 RHOGP84095 191 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 LINC01559Q495D7 138 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 TACC2O95359 2948 aa12.96□□□□□ -0.34
CMTM3-213ENST00000566756 H0Y8G0 127 aa12.95□□□□□ -0.34
CMTM3-213ENST00000566756 TWIST1Q15672 202 aa12.95□□□□□ -0.34
CMTM3-213ENST00000566756 ZNF575Q86XF7 245 aa12.95□□□□□ -0.34
CMTM3-213ENST00000566756 MRPL53Q96EL3 112 aaKnown RBP12.95□□□□□ -0.34
CMTM3-213ENST00000566756 ATP6V0BQ99437 205 aa12.95□□□□□ -0.34
CMTM3-213ENST00000566756 NCR2O95944 276 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 C15orf32Q32M92 178 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 FAM106AQ4KMX7 169 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 LOC389332A0A1B0GUA5 103 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 LOXL1Q08397 574 aaPredicted RBP12.94□□□□□ -0.34
CMTM3-213ENST00000566756 C2orf91Q6ZV80 131 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 Q8TAT8 98 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 MCRIP2Q9BUT9 160 aaKnown RBP12.94□□□□□ -0.34
CMTM3-213ENST00000566756 HIF1ANQ9NWT6 349 aa12.94□□□□□ -0.34
CMTM3-213ENST00000566756 SEC11AP67812 179 aa12.93□□□□□ -0.34
CMTM3-213ENST00000566756 Q6ZVH6 145 aa12.93□□□□□ -0.34
CMTM3-213ENST00000566756 TP73-AS1Q9UF72 201 aa12.93□□□□□ -0.34
CMTM3-213ENST00000566756 TIMM8BQ9Y5J9 83 aaPredicted RBP12.93□□□□□ -0.34
CMTM3-213ENST00000566756 MUC21A0A0G2JKD1 596 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 MUC21A0A140T8X8 626 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 NPYP01303 97 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 MUC21Q5SSG8 566 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 OR8A1Q8NGG7 326 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 RNF185Q96GF1 192 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 MAP1LC3AQ9H492 121 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 UTP20O75691 2785 aaKnown RBP12.92□□□□□ -0.34
CMTM3-213ENST00000566756 TRBV7-1A0A0A6YYK4 115 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 SIVA1O15304 175 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 FGF6P10767 208 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 PIFOQ8TCI5 191 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 NRGNQ92686 78 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 IFI27L1Q96BM0 104 aa12.92□□□□□ -0.34
CMTM3-213ENST00000566756 CHD6Q8TD26 2715 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 ATP6V0E1O15342 81 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 ORM1P02763 201 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 PRB4P10163 310 aaPredicted RBP12.91□□□□□ -0.34
CMTM3-213ENST00000566756 SLC25A16P16260 332 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 HLA-DMBP28068 263 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 EEF1AKMT3Q96AZ1 226 aa12.91□□□□□ -0.34
CMTM3-213ENST00000566756 NXT2Q9NPJ8 142 aaKnown RBP12.91□□□□□ -0.34
CMTM3-213ENST00000566756 CLPSL1A2RUU4 121 aa12.9□□□□□ -0.34
CMTM3-213ENST00000566756 CLEC3BP05452 202 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 318.9 ms