RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 VGLL1Q99990 258 aa13.33□□□□□ -0.28
HERC2-208ENST00000566635 PSG8Q9UQ74 426 aa13.33□□□□□ -0.28
HERC2-208ENST00000566635 SFRP2Q96HF1 295 aa13.32□□□□□ -0.28
HERC2-208ENST00000566635 DEFB1P60022 68 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 FAM24BQ8N5W8 94 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 ARL6IP6Q8N6S5 226 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 Q8TAT8 98 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 MRPL53Q96EL3 112 aaKnown RBP13.31□□□□□ -0.28
HERC2-208ENST00000566635 SERTM2A0A1B0GWG4 89 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 OVOL1O14753 267 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 GCGP01275 180 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 ERCC8Q13216 396 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 ZNF738Q8NE65 137 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 MLST8Q9BVC4 326 aa13.31□□□□□ -0.28
HERC2-208ENST00000566635 TRBV6-1A0A0K0K1D8 114 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 HOXA5P20719 270 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 PRR27Q6MZM9 219 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 RNASE7Q9H1E1 156 aaKnown RBP13.3□□□□□ -0.28
HERC2-208ENST00000566635 ATRQ13535 2644 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 KRTAP24-1Q3LI83 254 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 DNLZQ5SXM8 178 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 DYNLRB2Q8TF09 96 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
HERC2-208ENST00000566635 H7BYZ3 331 aa13.29□□□□□ -0.28
HERC2-208ENST00000566635 ZNF705DP0CH99 300 aaPredicted RBP13.29□□□□□ -0.28
HERC2-208ENST00000566635 ZNF705BP0CI00 300 aaPredicted RBP13.29□□□□□ -0.28
HERC2-208ENST00000566635 CTDSP1Q9GZU7 261 aa13.29□□□□□ -0.28
HERC2-208ENST00000566635 CLEC5AQ9NY25 188 aa13.29□□□□□ -0.28
HERC2-208ENST00000566635 K7EQG2 157 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 ERVFC1-1P60608 527 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 TMEM183AQ8IXX5 376 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 TMEM61Q8N0U2 210 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 C8orf49Q96NF6 230 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 LINC00322Q6ZN03 302 aaPredicted RBP13.28□□□□□ -0.28
HERC2-208ENST00000566635 OR10G8Q8NGN5 311 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 ANAPC16Q96DE5 110 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 GPR61Q9BZJ8 451 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 URGCP-MRPS24S4R325 110 aa13.28□□□□□ -0.28
HERC2-208ENST00000566635 F6UB75 175 aa13.27□□□□□ -0.28
HERC2-208ENST00000566635 ZNF688P0C7X2 276 aa13.27□□□□□ -0.28
HERC2-208ENST00000566635 PRIMA1Q86XR5 153 aa13.27□□□□□ -0.28
HERC2-208ENST00000566635 ZC2HC1AQ96GY0 325 aa13.27□□□□□ -0.28
HERC2-208ENST00000566635 TMEM242Q9NWH2 141 aa13.27□□□□□ -0.28
HERC2-208ENST00000566635 FBN1P35555 2871 aaKnown RBP13.27□□□□□ -0.29
HERC2-208ENST00000566635 RBAKDNA6NC62 111 aa13.27□□□□□ -0.29
HERC2-208ENST00000566635 ID1P41134 155 aa13.27□□□□□ -0.29
HERC2-208ENST00000566635 DEFA6Q01524 100 aa13.27□□□□□ -0.29
HERC2-208ENST00000566635 DEFB114Q30KQ6 69 aa13.27□□□□□ -0.29
HERC2-208ENST00000566635 IBA57Q5T440 356 aaKnown RBP13.27□□□□□ -0.29
HERC2-208ENST00000566635 ZFP30Q9Y2G7 519 aa13.27□□□□□ -0.29
HERC2-208ENST00000566635 CD300EQ496F6 205 aaPredicted RBP13.26□□□□□ -0.29
HERC2-208ENST00000566635 SAMD13Q5VXD3 122 aa13.26□□□□□ -0.29
HERC2-208ENST00000566635 CITED1Q99966 193 aa13.26□□□□□ -0.29
HERC2-208ENST00000566635 AGPAT4-IT1Q9H0P7 198 aa13.26□□□□□ -0.29
HERC2-208ENST00000566635 PYY3Q5JQD4 70 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 PSMG4Q5JS54 123 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 RBPMS2Q6ZRY4 209 aaKnown RBP13.25□□□□□ -0.29
HERC2-208ENST00000566635 PRR25Q96S07 402 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 V9GYV3 84 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 VWFP04275 2813 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 IFITM10A6NMD0 228 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 PF4P02776 101 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 OSTCQ9NRP0 149 aa13.25□□□□□ -0.29
HERC2-208ENST00000566635 IZUMO1RA6ND01 250 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 CXorf65A6NEN9 183 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 PPP1R2P9O14990 202 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 PAFAH1B2P68402 229 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 C9orf47Q6ZRZ4 202 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 FBLL1A6NHQ2 334 aaKnown RBP13.24□□□□□ -0.29
HERC2-208ENST00000566635 SAP30O75446 220 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 HIST1H1AQ02539 215 aaPredicted RBP13.24□□□□□ -0.29
HERC2-208ENST00000566635 ELOBQ15370 118 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 TMEM78Q5T7P6 136 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 NUDT10Q8NFP7 164 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 NUDT11Q96G61 164 aa13.24□□□□□ -0.29
HERC2-208ENST00000566635 CA1P00915 261 aaPredicted RBP13.23□□□□□ -0.29
HERC2-208ENST00000566635 SNRPD3P62318 126 aaKnown RBP13.23□□□□□ -0.29
HERC2-208ENST00000566635 GDF5OSQ5U4N7 250 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 FAM231DQ6ZW35 169 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 LINC00482Q8N8I6 264 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 OR8A1Q8NGG7 326 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 SIGLEC8Q9NYZ4 499 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 ZNF492Q9P255 531 aa13.23□□□□□ -0.29
HERC2-208ENST00000566635 NPIPB6E9PJ23 425 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 CRIP1P50238 77 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 ZNF138P52744 262 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 OR10J6PQ8NGY7 276 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 ZNF705GA8MUZ8 300 aaPredicted RBP13.22□□□□□ -0.29
HERC2-208ENST00000566635 SAPCD1Q5SSQ6 148 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 C14orf144Q96I85 54 aa13.22□□□□□ -0.29
HERC2-208ENST00000566635 TGIF2-C20orf24A0A0A6YYL0 155 aa13.21□□□□□ -0.29
HERC2-208ENST00000566635 PFN1P07737 140 aaKnown RBP13.21□□□□□ -0.29
HERC2-208ENST00000566635 CXCL1P09341 107 aa13.21□□□□□ -0.29
HERC2-208ENST00000566635 S100A2P29034 98 aa13.21□□□□□ -0.29
HERC2-208ENST00000566635 ZNF80P51504 273 aaPredicted RBP13.21□□□□□ -0.29
HERC2-208ENST00000566635 SPATA3Q8NHX4 192 aa13.21□□□□□ -0.29
HERC2-208ENST00000566635 NDFIP1Q9BT67 221 aa13.21□□□□□ -0.29
HERC2-208ENST00000566635 CD33P20138 364 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms