RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CBLN4Q9NTU7 201 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 PRR34Q9NV39 138 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 TENM4Q6N022 2769 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 RELNP78509 3460 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 LCTP09848 1927 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 LTBP2Q14767 1821 aa2.01□□□□□ -2.09
HERPUD1-211ENST00000566550 TRGV5A0A0B4J1U4 118 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 IGHV1-58A0A0C4DH39 117 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A1B0GU33 70 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 ARRDC5A6NEK1 342 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 H7C2G1 150 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 DLEU1O43261 78 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 TPST1O60507 370 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 TCL1BO95988 128 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 HTR1AP08908 422 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 EVI2AP22794 236 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 CD24P25063 80 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 RNASE4P34096 147 aaKnown RBP2□□□□□ -2.09
HERPUD1-211ENST00000566550 RPL35P42766 123 aaKnown RBP2□□□□□ -2.09
HERPUD1-211ENST00000566550 HES1Q14469 280 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 NDUFA5Q16718 116 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 MORN2Q502X0 79 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 C22orf39Q6P5X5 142 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 LYZL1Q6UWQ5 148 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 SLC30A7Q8NEW0 376 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 OR4E2Q8NGC2 313 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 AQP3Q92482 292 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 HIGD2AQ9BW72 106 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 OR5AC2Q9NZP5 309 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 TNFSF18Q9UNG2 199 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 R4GN34 69 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 HSPE1-MOB4S4R3N1 261 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 ECM29Q5VYK3 1845 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 SPTBN2O15020 2390 aa2□□□□□ -2.09
HERPUD1-211ENST00000566550 UBR5O95071 2799 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 NAV3Q8IVL0 2385 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 DMDP11532 3685 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 AFDNP55196 1824 aaKnown RBP1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 MYO10Q9HD67 2058 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 TRAV7A0A075B6U4 112 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A096LPI6 279 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A0D9SG52 128 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A0J9YX75 114 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A1B0GVG6 124 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM25AB3EWG3 89 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM25CB3EWG5 89 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM25GB3EWG6 89 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 F8W036 122 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 C3orf84H3BNL1 204 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 RER1O15258 196 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 HIST1H2BKO60814 126 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 HIST1H2BJP06899 126 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 HLA-EP13747 358 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 NFYAP23511 347 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 KRTAP10-3P60369 221 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 DYNLT1P63172 113 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 MYL5Q02045 173 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 PYDC2Q56P42 97 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 AMMECR1LQ6DCA0 310 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 RNF182Q8N6D2 247 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 OR5D16Q8NGK9 328 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 OR5H6Q8NGV6 325 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 PFN4Q8NHR9 129 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 C2orf88Q9BSF0 95 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 NIT2Q9NQR4 276 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 SMAD5-AS1Q9Y6J3 95 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 HEATR5AQ86XA9 2040 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 NRXN2Q9P2S2 1712 aa1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 NUP210Q8TEM1 1887 aaPredicted RBP1.99□□□□□ -2.09
HERPUD1-211ENST00000566550 MED23Q9ULK4 1368 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 RP1L1Q8IWN7 2480 aaPredicted RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 TRPM6Q9BX84 2022 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 LOC400499M0QZD8 3231 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 IGLV4-60A0A075B6I1 120 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 TRAV3A0A0B4J244 114 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 A0A1B0GVY2 172 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 MIF4GDA9UHW6 222 aaKnown RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ATP6V1G2-DDX39BF2Z307 99 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ZZEF1O43149 2961 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ZNF705BP0CI00 300 aaPredicted RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 LINC00694P0DN24 101 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ZNF14P17017 642 aaPredicted RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 KDELR1P24390 212 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 COL8A2P25067 703 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 COPZ1P61923 177 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 NCS1P62166 190 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 RPS25P62851 125 aaKnown RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 EBI3Q14213 229 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 WHAMMP3Q1A5X7 153 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 GLYATL3Q5SZD4 288 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 FAM27BQ5VT28 67 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 Q5XG85 94 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 LCN15Q6UWW0 184 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 AAED1Q7RTV5 226 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ARL11Q969Q4 196 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 BANF2Q9H503 90 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ANAPC11Q9NYG5 84 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 MARCOQ9UEW3 520 aaPredicted RBP1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 ERG28Q9UKR5 140 aa1.98□□□□□ -2.09
HERPUD1-211ENST00000566550 HHLA3Q9XRX5 114 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms