RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 NBDYA0A0U1RRE5 68 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 KLLNB2CW77 178 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 INMT-MINDY4F8WBC2 141 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 MED14OSP0DP75 135 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 EXOC3-AS1Q8N2X6 119 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 FAM167A-AS1Q96KT0 104 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 FAM19A4Q96LR4 140 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 MRPL32Q9BYC8 188 aaKnown RBP14.08□□□□□ -0.16
CLN6-207ENST00000566347 AGPAT4-IT1Q9H0P7 198 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 LINC00588Q9Y4M8 146 aa14.08□□□□□ -0.16
CLN6-207ENST00000566347 TRAV26-1A0A087WT03 109 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 NMBP08949 121 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 ICAM4Q14773 271 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 TMEM78Q5T7P6 136 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 C9orf47Q6ZRZ4 202 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 MIR17HGQ75NE6 70 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 RXFP4Q8TDU9 374 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 LINC00467Q9BRT7 94 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 WDR61Q9GZS3 305 aaKnown RBP14.07□□□□□ -0.16
CLN6-207ENST00000566347 OR51M1Q9H341 326 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 PTTG2Q9NZH5 202 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 DNAH11Q96DT5 4516 aa14.07□□□□□ -0.16
CLN6-207ENST00000566347 C17orf112F2Z3M2 114 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 H0YIZ8 118 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 NBEAP1P0C6P0 100 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 CRISP2P16562 243 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 IFITM3Q01628 133 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 SSX7Q7RTT5 188 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 MARVELD1Q9BSK0 173 aa14.06□□□□□ -0.16
CLN6-207ENST00000566347 DYNC1H1Q14204 4646 aaKnown RBP14.05□□□□□ -0.16
CLN6-207ENST00000566347 A6NHS1 94 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 H3BNG1 76 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 ZNF324O75467 553 aaPredicted RBP14.05□□□□□ -0.16
CLN6-207ENST00000566347 GPX1P07203 203 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 HOXA5P20719 270 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 RNASE4P34096 147 aaKnown RBP14.05□□□□□ -0.16
CLN6-207ENST00000566347 BTN1A1Q13410 526 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 ANXA2RQ3ZCQ2 193 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 FAM122CQ6P4D5 195 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 EIF4E3Q8N5X7 224 aaKnown RBP14.05□□□□□ -0.16
CLN6-207ENST00000566347 PPP1R1CQ8WVI7 109 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 PAXXQ9BUH6 204 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 KRTAP17-1Q9BYP8 105 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 FUT9Q9Y231 359 aa14.05□□□□□ -0.16
CLN6-207ENST00000566347 PET100P0DJ07 73 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 H2BFSP57053 126 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 CD300CQ08708 224 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 Q6ZTI0 123 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 C6orf223Q8N319 242 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 C11orf72Q8NBR9 251 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 ATP5SQ99766 215 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 TMPRSS5Q9H3S3 457 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 GSN-AS1Q9NRJ2 163 aa14.04□□□□□ -0.16
CLN6-207ENST00000566347 TRGV2A0A075B6R0 118 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 IGKV2-40A0A087WW87 121 aaPredicted RBP14.03□□□□□ -0.16
CLN6-207ENST00000566347 A0A0J9YY99 117 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 IGKV2D-40P01614 121 aaPredicted RBP14.03□□□□□ -0.16
CLN6-207ENST00000566347 DEFA1P59665 94 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 DEFA3P59666 94 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 FXYD5Q96DB9 178 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 C18orf15Q96N68 181 aa14.03□□□□□ -0.16
CLN6-207ENST00000566347 SSNA1O43805 119 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 OR10J4P0C629 311 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 ZFAND2AQ8N6M9 145 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 VGLL1Q99990 258 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 Q9H8V8 135 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 ZNF492Q9P255 531 aa14.02□□□□□ -0.17
CLN6-207ENST00000566347 TRBV7-9A0A0J9YWB2 115 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 RGS13O14921 159 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 OR7C2O60412 319 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 MPC2O95563 127 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 CSN1S1P47710 185 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 ZNF138P52744 262 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 IBA57Q5T440 356 aaKnown RBP14.01□□□□□ -0.17
CLN6-207ENST00000566347 LYPD1Q8N2G4 141 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 HSPB11Q9Y547 144 aa14.01□□□□□ -0.17
CLN6-207ENST00000566347 TRGV1A0A0A0MS02 117 aa14□□□□□ -0.17
CLN6-207ENST00000566347 TCL1AP56279 114 aa14□□□□□ -0.17
CLN6-207ENST00000566347 TTC32Q5I0X7 151 aa14□□□□□ -0.17
CLN6-207ENST00000566347 SCGB1C1Q8TD33 95 aa14□□□□□ -0.17
CLN6-207ENST00000566347 PHYHIPLQ96FC7 376 aa14□□□□□ -0.17
CLN6-207ENST00000566347 UPK3BQ9BT76 320 aa14□□□□□ -0.17
CLN6-207ENST00000566347 SPINK4O60575 86 aa13.99□□□□□ -0.17
CLN6-207ENST00000566347 IFNA5P01569 189 aa13.99□□□□□ -0.17
CLN6-207ENST00000566347 FFAR4Q5NUL3 377 aa13.99□□□□□ -0.17
CLN6-207ENST00000566347 IGHV1OR15-1A0A075B7D0 117 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 RBAKDNA6NC62 111 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 RPL12P30050 165 aaKnown RBP13.98□□□□□ -0.17
CLN6-207ENST00000566347 TAS2R45P59539 299 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 RANP62826 216 aaKnown RBP13.98□□□□□ -0.17
CLN6-207ENST00000566347 UBE2L3P68036 154 aaKnown RBP13.98□□□□□ -0.17
CLN6-207ENST00000566347 TNP2Q05952 138 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 ESRGQ1W209 222 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 KHDC3LQ587J8 217 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 PRR9Q5T870 116 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 ARPC5LQ9BPX5 153 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 MRPS16Q9Y3D3 137 aaKnown RBP13.98□□□□□ -0.17
CLN6-207ENST00000566347 KLF12Q9Y4X4 402 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 MUC4Q99102 2169 aa13.98□□□□□ -0.17
CLN6-207ENST00000566347 ZNF575Q86XF7 245 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms