RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 NPYP01303 97 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 TWIST1Q15672 202 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 KLK9Q2XQG4 91 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 CCDC144NLQ6NUI1 221 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 OR2K2Q8NGT1 345 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 ABHD17AQ96GS6 310 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 KLK9Q9UKQ9 250 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 A0A0G2JLM5 398 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 FABP5P3A8MUU1 101 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 F8W735 103 aaPredicted RBP16.84■□□□□ 0.29
SPSB3-208ENST00000566339 ATP5LO75964 103 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 ARPC1AQ92747 370 aa16.84■□□□□ 0.29
SPSB3-208ENST00000566339 ARFGEF3Q5TH69 2177 aa16.83■□□□□ 0.29
SPSB3-208ENST00000566339 PRSS47A8MTI9 375 aa16.83■□□□□ 0.28
SPSB3-208ENST00000566339 SMIM17P0DL12 118 aa16.83■□□□□ 0.28
SPSB3-208ENST00000566339 CSTL1Q9H114 145 aa16.83■□□□□ 0.28
SPSB3-208ENST00000566339 RNF185Q96GF1 192 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 ONECUT1Q9UBC0 465 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 MALRD1Q5VYJ5 2156 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 EVI2AP22794 236 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 EBI3Q14213 229 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 C1orf122Q6ZSJ8 110 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 PSMG3-AS1Q96PY0 264 aa16.82■□□□□ 0.28
SPSB3-208ENST00000566339 RELNP78509 3460 aa16.81■□□□□ 0.28
SPSB3-208ENST00000566339 IGKV2-40A0A087WW87 121 aaPredicted RBP16.81■□□□□ 0.28
SPSB3-208ENST00000566339 IGKV2D-40P01614 121 aaPredicted RBP16.81■□□□□ 0.28
SPSB3-208ENST00000566339 PRTN3P24158 256 aa16.81■□□□□ 0.28
SPSB3-208ENST00000566339 SRSF1Q07955 248 aaKnown RBP eCLIP16.81■□□□□ 0.28
SPSB3-208ENST00000566339 NEGR1Q7Z3B1 354 aa16.81■□□□□ 0.28
SPSB3-208ENST00000566339 TMSB15BA0A087X1C1 80 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.8■□□□□ 0.28
SPSB3-208ENST00000566339 A0A1W2PPM0 123 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 SNAI2O43623 268 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 ASCL2Q99929 193 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 VKORC1Q9BQB6 163 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 TENM4Q6N022 2769 aa16.8■□□□□ 0.28
SPSB3-208ENST00000566339 H3BUT2 72 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 PLA2G2AP14555 144 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 DLX1P56177 255 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 FOXE3Q13461 319 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 ZNF672Q499Z4 452 aaPredicted RBP16.79■□□□□ 0.28
SPSB3-208ENST00000566339 Q8N6K4 173 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 SLC50A1Q9BRV3 221 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 PLXNB1O43157 2135 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 G3V4G9 280 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 MINOS1Q5TGZ0 78 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 MRPL53Q96EL3 112 aaKnown RBP16.79■□□□□ 0.28
SPSB3-208ENST00000566339 JMJD8Q96S16 334 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 MINOS1-NBL1R4GNA1 71 aa16.79■□□□□ 0.28
SPSB3-208ENST00000566339 RP1L1Q8IWN7 2480 aaPredicted RBP16.78■□□□□ 0.28
SPSB3-208ENST00000566339 SMIM13P0DJ93 91 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 UQCRFS1P47985 274 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 ODF1Q14990 250 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 FBXL19-AS1Q494R0 122 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 Q8N8P6 123 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 TIMD4Q96H15 378 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 HIF1ANQ9NWT6 349 aa16.78■□□□□ 0.28
SPSB3-208ENST00000566339 FABP2P12104 132 aa16.77■□□□□ 0.28
SPSB3-208ENST00000566339 SMAD5-AS1Q9Y6J3 95 aa16.77■□□□□ 0.28
SPSB3-208ENST00000566339 IGHG4P01861 327 aa16.77■□□□□ 0.27
SPSB3-208ENST00000566339 NMUP48645 174 aa16.77■□□□□ 0.27
SPSB3-208ENST00000566339 ZNF80P51504 273 aaPredicted RBP16.77■□□□□ 0.27
SPSB3-208ENST00000566339 TAL2Q16559 108 aa16.77■□□□□ 0.27
SPSB3-208ENST00000566339 MEGF9Q9H1U4 602 aa16.77■□□□□ 0.27
SPSB3-208ENST00000566339 TNFRSF6BO95407 300 aa16.76■□□□□ 0.27
SPSB3-208ENST00000566339 IGKCP01834 107 aa16.76■□□□□ 0.27
SPSB3-208ENST00000566339 CTSGP08311 255 aa16.76■□□□□ 0.27
SPSB3-208ENST00000566339 ZNF575Q86XF7 245 aa16.76■□□□□ 0.27
SPSB3-208ENST00000566339 SH3BGRL2Q9UJC5 107 aa16.76■□□□□ 0.27
SPSB3-208ENST00000566339 LEPP41159 167 aa16.75■□□□□ 0.27
SPSB3-208ENST00000566339 KLF17Q5JT82 389 aaPredicted RBP16.75■□□□□ 0.27
SPSB3-208ENST00000566339 VGLL1Q99990 258 aa16.75■□□□□ 0.27
SPSB3-208ENST00000566339 HHLA3Q9XRX5 114 aa16.75■□□□□ 0.27
SPSB3-208ENST00000566339 SPCS1Q9Y6A9 102 aa16.75■□□□□ 0.27
SPSB3-208ENST00000566339 PCP2Q8IVA1 136 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 BCL6BQ8N143 479 aaPredicted RBP16.74■□□□□ 0.27
SPSB3-208ENST00000566339 DKK2Q9UBU2 259 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 HILPDAQ9Y5L2 63 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 DPM2O94777 84 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 ORM1P02763 201 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 HES1Q14469 280 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 PRSS57Q6UWY2 283 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 TM2D2Q9BX73 214 aa16.74■□□□□ 0.27
SPSB3-208ENST00000566339 NBASA2RRP1 2371 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 LYNX1G3V0Z9 82 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 SMKR1H3BMG3 65 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 J3QKU1 62 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 ROS1P08922 2347 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 LYNX1P0DP58 116 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 PRB3Q04118 309 aaPredicted RBP16.73■□□□□ 0.27
SPSB3-208ENST00000566339 PRR30Q53SZ7 412 aaPredicted RBP16.73■□□□□ 0.27
SPSB3-208ENST00000566339 COL12A1Q99715 3063 aa16.73■□□□□ 0.27
SPSB3-208ENST00000566339 IGHV4-4A0A075B6R2 117 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 IL17RELQ6ZVW7 336 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 FAM110DQ8TAY7 271 aaPredicted RBP16.72■□□□□ 0.27
SPSB3-208ENST00000566339 MYO18BQ8IUG5 2567 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 PKDREJQ9NTG1 2253 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 IGLV2-18A0A075B6J9 118 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 SAMD5Q5TGI4 173 aa16.72■□□□□ 0.27
SPSB3-208ENST00000566339 LINC01619G3V211 115 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms