RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 MIR17HGQ75NE6 70 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 SSX7Q7RTT5 188 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 ZNF575Q86XF7 245 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 ENKURQ8TC29 256 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 GNPNAT1Q96EK6 184 aaPredicted RBP12.74□□□□□ -0.37
USB1-213ENST00000566292 LINC00477Q96M19 166 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 AGPAT4-IT1Q9H0P7 198 aa12.74□□□□□ -0.37
USB1-213ENST00000566292 A0A0J9YY99 117 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 ZNF324O75467 553 aaPredicted RBP12.73□□□□□ -0.37
USB1-213ENST00000566292 UPK1BO75841 260 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 M6PRP20645 277 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 IFITM3Q01628 133 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 TNP2Q05952 138 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 CD300CQ08708 224 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 DAZ2Q13117 558 aaKnown RBP12.73□□□□□ -0.37
USB1-213ENST00000566292 BTN1A1Q13410 526 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 LRRC37A5PQ49AS3 106 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 Q6ZTI0 123 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 RXFP4Q8TDU9 374 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 NMES1Q9C002 83 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 SLC25A31Q9H0C2 315 aa12.73□□□□□ -0.37
USB1-213ENST00000566292 E5RGE8 158 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 C6orf223Q8N319 242 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 ZNF503Q96F45 646 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 TMPRSS5Q9H3S3 457 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
USB1-213ENST00000566292 IGKV2-40A0A087WW87 121 aaPredicted RBP12.71□□□□□ -0.37
USB1-213ENST00000566292 IGKV2D-40P01614 121 aaPredicted RBP12.71□□□□□ -0.37
USB1-213ENST00000566292 ICAM4Q14773 271 aa12.71□□□□□ -0.37
USB1-213ENST00000566292 C9orf47Q6ZRZ4 202 aa12.71□□□□□ -0.37
USB1-213ENST00000566292 LINC00467Q9BRT7 94 aa12.71□□□□□ -0.37
USB1-213ENST00000566292 WDR61Q9GZS3 305 aaKnown RBP12.71□□□□□ -0.37
USB1-213ENST00000566292 AAMDCQ9H7C9 122 aa12.71□□□□□ -0.37
USB1-213ENST00000566292 RYR1P21817 5038 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 NBEAP1P0C6P0 100 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 CRISP2P16562 243 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 RNASE4P34096 147 aaKnown RBP12.7□□□□□ -0.38
USB1-213ENST00000566292 PRR9Q5T870 116 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 FAM122CQ6P4D5 195 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 ZFAND2AQ8N6M9 145 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 VGLL1Q99990 258 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 OR51M1Q9H341 326 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 Q9H8V8 135 aa12.7□□□□□ -0.38
USB1-213ENST00000566292 INMT-MINDY4F8WBC2 141 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 H3BNG1 76 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 PRAF2O60831 178 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 H2BFSP57053 126 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 ESRGQ1W209 222 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 Q6ZQT7 251 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 EIF4E3Q8N5X7 224 aaKnown RBP12.69□□□□□ -0.38
USB1-213ENST00000566292 ZNF680Q8NEM1 530 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 FXYD5Q96DB9 178 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 KRTAP1-5Q9BYS1 174 aa12.69□□□□□ -0.38
USB1-213ENST00000566292 GPX1P07203 203 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 OR10J4P0C629 311 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 CYCSP99999 105 aaKnown RBP12.68□□□□□ -0.38
USB1-213ENST00000566292 PHYHIPLQ96FC7 376 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 VSIG2Q96IQ7 327 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 C18orf15Q96N68 181 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 PAXXQ9BUH6 204 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 MRPL32Q9BYC8 188 aaKnown RBP12.68□□□□□ -0.38
USB1-213ENST00000566292 KLF12Q9Y4X4 402 aa12.68□□□□□ -0.38
USB1-213ENST00000566292 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 A6NHS1 94 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 TMEM78Q5T7P6 136 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 UPK3BQ9BT76 320 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 ZNF492Q9P255 531 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 TP53TG3Q9ULZ0 132 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 FUT9Q9Y231 359 aa12.67□□□□□ -0.38
USB1-213ENST00000566292 TRGV2A0A075B6R0 118 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 SPINK4O60575 86 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 NMBP08949 121 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 TCL1AP56279 114 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 MARVELD1Q9BSK0 173 aa12.66□□□□□ -0.38
USB1-213ENST00000566292 A0A096LPF7 62 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 Q8TAT8 98 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 ATP5SQ99766 215 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 Q9H3A6 140 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 MRPS16Q9Y3D3 137 aaKnown RBP12.65□□□□□ -0.38
USB1-213ENST00000566292 HSPG2P98160 4391 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 LRP1BQ9NZR2 4599 aa12.65□□□□□ -0.38
USB1-213ENST00000566292 C17orf112F2Z3M2 114 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 RGS13O14921 159 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 OR7C2O60412 319 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 MPC2O95563 127 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
USB1-213ENST00000566292 PTTG2Q9NZH5 202 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 HSPB11Q9Y547 144 aa12.64□□□□□ -0.39
USB1-213ENST00000566292 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
USB1-213ENST00000566292 ZNF138P52744 262 aa12.63□□□□□ -0.39
USB1-213ENST00000566292 TTC32Q5I0X7 151 aa12.63□□□□□ -0.39
USB1-213ENST00000566292 FFAR4Q5NUL3 377 aa12.63□□□□□ -0.39
USB1-213ENST00000566292 TRBV7-9A0A0J9YWB2 115 aa12.62□□□□□ -0.39
USB1-213ENST00000566292 C16orf90A8MZG2 172 aa12.62□□□□□ -0.39
USB1-213ENST00000566292 RANP62826 216 aaKnown RBP12.62□□□□□ -0.39
USB1-213ENST00000566292 SMIM3Q9BZL3 60 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms