RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 BLNKQ8WV28 456 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 KRTAP4-5Q9BYR2 181 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 AGPAT4-IT1Q9H0P7 198 aa16.47■□□□□ 0.23
RAB40C-209ENST00000565511 C7orf71A4D174 169 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 SNURFLB1AK76 121 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 KLLNB2CW77 178 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 RLN2P04090 185 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 M6PRP20645 277 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 CLINT1Q14677 625 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 MIR17HGQ75NE6 70 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 RXFP4Q8TDU9 374 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 GNPNAT1Q96EK6 184 aaPredicted RBP16.46■□□□□ 0.23
RAB40C-209ENST00000565511 GSN-AS1Q9NRJ2 163 aa16.46■□□□□ 0.23
RAB40C-209ENST00000565511 IGKV2-40A0A087WW87 121 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-209ENST00000565511 ZNF324O75467 553 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-209ENST00000565511 IGKV2D-40P01614 121 aaPredicted RBP16.45■□□□□ 0.22
RAB40C-209ENST00000565511 IFITM3Q01628 133 aa16.45■□□□□ 0.22
RAB40C-209ENST00000565511 ATP6V1FQ16864 119 aa16.45■□□□□ 0.22
RAB40C-209ENST00000565511 PYGO2Q9BRQ0 406 aa16.45■□□□□ 0.22
RAB40C-209ENST00000565511 DNAH5Q8TE73 4624 aa16.44■□□□□ 0.22
RAB40C-209ENST00000565511 SLC25A5P05141 298 aaKnown RBP16.44■□□□□ 0.22
RAB40C-209ENST00000565511 DAZ2Q13117 558 aaKnown RBP16.44■□□□□ 0.22
RAB40C-209ENST00000565511 MZT2BQ6NZ67 158 aa16.44■□□□□ 0.22
RAB40C-209ENST00000565511 OR5C1Q8NGR4 320 aa16.44■□□□□ 0.22
RAB40C-209ENST00000565511 VGLL1Q99990 258 aa16.44■□□□□ 0.22
RAB40C-209ENST00000565511 TIMM9Q9Y5J7 89 aa16.44■□□□□ 0.22
RAB40C-209ENST00000565511 APOBP04114 4563 aaKnown RBP16.44■□□□□ 0.22
RAB40C-209ENST00000565511 ESRGQ1W209 222 aa16.43■□□□□ 0.22
RAB40C-209ENST00000565511 MPDU1O75352 247 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 RNASE4P34096 147 aaKnown RBP16.42■□□□□ 0.22
RAB40C-209ENST00000565511 PDE6HQ13956 83 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 ICAM4Q14773 271 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 LRRC37A5PQ49AS3 106 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 ZFAND2AQ8N6M9 145 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 VSIG2Q96IQ7 327 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 Q9H8V8 135 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 PRELID1Q9Y255 219 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 KLF12Q9Y4X4 402 aa16.42■□□□□ 0.22
RAB40C-209ENST00000565511 CRISP2P16562 243 aa16.41■□□□□ 0.22
RAB40C-209ENST00000565511 FAM122CQ6P4D5 195 aa16.41■□□□□ 0.22
RAB40C-209ENST00000565511 C9orf47Q6ZRZ4 202 aa16.41■□□□□ 0.22
RAB40C-209ENST00000565511 ZNF503Q96F45 646 aa16.41■□□□□ 0.22
RAB40C-209ENST00000565511 TP53TG3Q9ULZ0 132 aa16.41■□□□□ 0.22
RAB40C-209ENST00000565511 FXYD5Q96DB9 178 aa16.4■□□□□ 0.22
RAB40C-209ENST00000565511 PHYHIPLQ96FC7 376 aa16.4■□□□□ 0.22
RAB40C-209ENST00000565511 LINC00477Q96M19 166 aa16.4■□□□□ 0.22
RAB40C-209ENST00000565511 LINC00467Q9BRT7 94 aa16.4■□□□□ 0.22
RAB40C-209ENST00000565511 UPK1BO75841 260 aa16.39■□□□□ 0.21
RAB40C-209ENST00000565511 OR10J4P0C629 311 aa16.39■□□□□ 0.21
RAB40C-209ENST00000565511 LINC00299Q6ZSB3 139 aa16.39■□□□□ 0.21
RAB40C-209ENST00000565511 ENKURQ8TC29 256 aa16.39■□□□□ 0.21
RAB40C-209ENST00000565511 NMES1Q9C002 83 aa16.39■□□□□ 0.21
RAB40C-209ENST00000565511 WDR61Q9GZS3 305 aaKnown RBP16.39■□□□□ 0.21
RAB40C-209ENST00000565511 TRGV1A0A0A0MS02 117 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 E5RGE8 158 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 ANXA2RQ3ZCQ2 193 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 EIF4E3Q8N5X7 224 aaKnown RBP16.38■□□□□ 0.21
RAB40C-209ENST00000565511 Q8TAT8 98 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 S100ZQ8WXG8 99 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 UPK3BQ9BT76 320 aa16.38■□□□□ 0.21
RAB40C-209ENST00000565511 MRPS16Q9Y3D3 137 aaKnown RBP16.38■□□□□ 0.21
RAB40C-209ENST00000565511 A0A096LPF7 62 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 C16orf90A8MZG2 172 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 NBEAP1P0C6P0 100 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 H2BFSP57053 126 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 ZNF680Q8NEM1 530 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 SLC25A31Q9H0C2 315 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 OR51M1Q9H341 326 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 AAMDCQ9H7C9 122 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 FUT9Q9Y231 359 aa16.37■□□□□ 0.21
RAB40C-209ENST00000565511 H3BNG1 76 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 SPINK4O60575 86 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 EIF3GO75821 320 aaKnown RBP eCLIP16.36■□□□□ 0.21
RAB40C-209ENST00000565511 TCL1AP56279 114 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 C18orf15Q96N68 181 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 PAXXQ9BUH6 204 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 Q9H3A6 140 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 ZNF492Q9P255 531 aa16.36■□□□□ 0.21
RAB40C-209ENST00000565511 TRGV2A0A075B6R0 118 aa16.35■□□□□ 0.21
RAB40C-209ENST00000565511 GPX1P07203 203 aa16.35■□□□□ 0.21
RAB40C-209ENST00000565511 MRPL16Q9NX20 251 aaKnown RBP16.35■□□□□ 0.21
RAB40C-209ENST00000565511 INMT-MINDY4F8WBC2 141 aa16.34■□□□□ 0.21
RAB40C-209ENST00000565511 IGHV3-53P01767 116 aa16.34■□□□□ 0.21
RAB40C-209ENST00000565511 TMEM78Q5T7P6 136 aa16.34■□□□□ 0.21
RAB40C-209ENST00000565511 MRPL32Q9BYC8 188 aaKnown RBP16.34■□□□□ 0.21
RAB40C-209ENST00000565511 PPP1R1CQ8WVI7 109 aa16.33■□□□□ 0.2
RAB40C-209ENST00000565511 IGHV1OR15-1A0A075B7D0 117 aa16.32■□□□□ 0.2
RAB40C-209ENST00000565511 A6NHS1 94 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 RGS13O14921 159 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 PRAF2O60831 178 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 NMBP08949 121 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 ZNF138P52744 262 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 TTC32Q5I0X7 151 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 IBA57Q5T440 356 aaKnown RBP16.31■□□□□ 0.2
RAB40C-209ENST00000565511 SPATA12Q7Z6I5 190 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 ATP5SQ99766 215 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 HSPB11Q9Y547 144 aa16.31■□□□□ 0.2
RAB40C-209ENST00000565511 OR7C2O60412 319 aa16.3■□□□□ 0.2
RAB40C-209ENST00000565511 KRTAP10-2P60368 255 aa16.3■□□□□ 0.2
RAB40C-209ENST00000565511 ST6GAL2Q96JF0 529 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms