RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 LYRM9A8MSI8 78 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 SMLR1H3BR10 107 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 PFDN1O60925 122 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 OXTP01178 125 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 DEFB130BP0DP73 79 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 DEFB130AP0DP74 79 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 CXCL2P19875 107 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 ATP6V0CP27449 155 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 TAS2R45P59539 299 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 GUK1Q16774 197 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 LGALSLQ3ZCW2 172 aaPredicted RBP6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 ZFP69Q49AA0 526 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 FFAR4Q5NUL3 377 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 FAM78BQ5VT40 261 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 RPL7L1Q6DKI1 246 aaKnown RBP6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 EIF5AL1Q6IS14 154 aaKnown RBP6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 RSG1Q9BU20 258 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 SLC25A22Q9H936 323 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 TMEM14CQ9P0S9 112 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 DOK5Q9P104 306 aa6.26□□□□□ -1.41
VPS9D1-205ENST00000565452 A0A087X0K7 114 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 ISLRO14498 428 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 BCL2L11O43521 198 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 IGKV3-20P01619 116 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 ATP5G1P05496 136 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 SEC11BP0C7V7 166 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 ATP5G3P48201 142 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 FXYD7P58549 80 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 LINC00315P59091 139 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 HSD17B11Q8NBQ5 300 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 RNF141Q8WVD5 230 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 UHRF2Q96PU4 802 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 UPK3BQ9BT76 320 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 CYTL1Q9NRR1 136 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 FUT9Q9Y231 359 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
VPS9D1-205ENST00000565452 CBY3A6NI87 242 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 UMAD1C9J7I0 102 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 ZNF253O75346 499 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 HIST1H1EP10412 219 aaKnown RBP6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 PSMB3P49720 205 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 PDE6HQ13956 83 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 SPATA31B1PQ5VZV4 182 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 LCN15Q6UWW0 184 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 PQLC2Q6ZP29 291 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 Q6ZRN7 208 aaPredicted RBP6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 BAP18Q8IXM2 172 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 OR10G4Q8NGN3 311 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 OR10G9Q8NGN4 311 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 OR10G7Q8NGN6 311 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 LRRC20Q8TCA0 184 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 CLUHP3Q96NS8 147 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 SLC50A1Q9BRV3 221 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 TMEM208Q9BTX3 173 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 TMEM70Q9BUB7 260 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 ZNF471Q9BX82 626 aaPredicted RBP6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 SLC25A32Q9H2D1 315 aa6.24□□□□□ -1.41
VPS9D1-205ENST00000565452 MRPS12O15235 138 aaKnown RBP6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 RAB5CP51148 216 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 HAMPP81172 84 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 PSG9Q00887 426 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 ESRGQ1W209 222 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 KHDC3LQ587J8 217 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 AKR1C8PQ5T2L2 129 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 NFE4Q86UQ8 179 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 C1orf158Q8N1D5 194 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 C16orf92Q96LL3 132 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 ACTR3CQ9C0K3 210 aaPredicted RBP6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 OR51M1Q9H341 326 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 RPRMQ9NS64 109 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 PRELID1Q9Y255 219 aa6.23□□□□□ -1.41
VPS9D1-205ENST00000565452 A0A087WTM6 91 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 NBEAP1P0C6P0 100 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 IGLC2P0DOY2 106 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 CDC34P49427 236 aaPredicted RBP6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 DPPA3Q6W0C5 159 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 ARL6IP6Q8N6S5 226 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 OR4B1Q8NGF8 309 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 SAT2Q96F10 170 aaPredicted RBP6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 FAM167A-AS1Q96KT0 104 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 PAXXQ9BUH6 204 aa6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 MRPS16Q9Y3D3 137 aaKnown RBP6.22□□□□□ -1.41
VPS9D1-205ENST00000565452 TRAV5A0A0B4J249 113 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 CTXND1A0A1B0GTU2 59 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 SOCS3O14543 225 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 OR7C2O60412 319 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 CXorf1O96002 111 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 STAG3L2P0CL84 134 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 STAG3L3P0CL85 134 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 OR5I1Q13606 314 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 PSG3Q16557 428 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 GCSAMLQ5JQS6 135 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 MORN5Q5VZ52 161 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 MIR17HGQ75NE6 70 aa6.21□□□□□ -1.42
VPS9D1-205ENST00000565452 C9orf62Q8N4C0 152 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms