RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, human

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN9-204	ENST00000564970	FOXB1	Q99853	325 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	UPK3B	Q9BT76	320 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	KIAA1549	Q9HCM3	1950 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM208B	Q5VWN6	2430 aa		4.94	□□□□□ -1.62
PTPN9-204	ENST00000564970	TCF20	Q9UGU0	1960 aa	Known RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	SCN10A	Q9Y5Y9	1956 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV1-27	A0A075B6S5	117 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970		A0A0U1RQV1	116 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM236D	A0A1B0GTK5	79 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970		A0A1W2PRX2	142 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	hADV29S1	A0JD25	119 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970		D6R8Y8	96 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	MRPS12	O15235	138 aa	Known RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	NDUFC1	O43677	76 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	COX7A2P2	O60397	106 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM236C	P0DP71	79 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	CD70	P32970	193 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZNF137P	P52743	207 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZNF138	P52744	262 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	PLGLA	Q15195	96 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM19A1	Q7Z5A9	133 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	MDP1	Q86V88	176 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	NEXN-AS1	Q8NBZ9	246 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	NFAM1	Q8NET5	270 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	PHF3	Q92576	2039 aa	Known RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM167A-AS1	Q96KT0	104 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM19A4	Q96LR4	140 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	FOXC2	Q99958	501 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	SRXN1	Q9BYN0	137 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	PHPT1	Q9NRX4	125 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	PKIG	Q9Y2B9	76 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	MPDZ	O75970	2070 aa		4.93	□□□□□ -1.62
PTPN9-204	ENST00000564970	CACNA1I	Q9P0X4	2223 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	TMSB15B	A0A087X1C1	80 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGKV1D-43	A0A0B4J1Z2	117 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	C17orf100	A8MU93	164 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	INS-IGF2	F8WCM5	200 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	LCE2B	O14633	110 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	IGHV3-33	P01772	117 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	DEFA4	P12838	97 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	HOXB4	P17483	251 aa	Predicted RBP	4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	CKS2	P33552	79 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	NBL1	P41271	181 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	C2orf83	Q53S99	150 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM27B	Q5VT28	67 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	ATP5EP2	Q5VTU8	51 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	COX8C	Q7Z4L0	72 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	LYPD1	Q8N2G4	141 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	MAPKAPK5-AS1	Q8N8E1	139 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	SLC25A29	Q8N8R3	303 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	TMEM75	Q8N9X5	138 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	ITLN1	Q8WWA0	313 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM173A	Q9BQD7	235 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	PTPRB	P23467	1997 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	WDR87	Q6ZQQ6	2873 aa		4.92	□□□□□ -1.62
PTPN9-204	ENST00000564970	MAP1B	P46821	2468 aa	Known RBP	4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	ASPM	Q8IZT6	3477 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	GVINP1	Q7Z2Y8	2422 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	TRBV7-6	A0A0J9YX20	115 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	TEX49	A0A1B0GTD5	131 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZNF815P	A8K554	130 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	WNT10B	O00744	389 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	LYZL6	O75951	148 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	TCRA	P04437	139 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	SYNJ2BP	P57105	145 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	CFHR3	Q02985	330 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZNF672	Q499Z4	452 aa	Predicted RBP	4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	S100A7L2	Q5SY68	101 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	FAM222A	Q5U5X8	452 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	C10orf113	Q5VZT2	155 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q6ZRU5	148 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970		Q86TA4	180 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	PRR15	Q8IV56	129 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	EXOC3-AS1	Q8N2X6	119 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	LINC00311	Q8N616	119 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	PRSS33	Q8NF86	280 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	VKORC1	Q9BQB6	163 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	CNFN	Q9BYD5	112 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	DMXL1	Q9Y485	3027 aa		4.91	□□□□□ -1.62
PTPN9-204	ENST00000564970	ZFYVE26	Q68DK2	2539 aa		4.9	□□□□□ -1.62
PTPN9-204	ENST00000564970	PTPRZ1	P23471	2315 aa	Predicted RBP	4.9	□□□□□ -1.62
PTPN9-204	ENST00000564970	TRAV40	A0A0B4J280	105 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970		A0A0J9YX75	114 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	CYSRT1	A8MQ03	144 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970		H0YGG7	62 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGHV3-30	P01768	117 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	IGHV3-30-5	P0DP03	117 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	COX6B1	P14854	86 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	TFF2	Q03403	129 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	DAZAP2	Q15038	168 aa	Predicted RBP	4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	MRPL51	Q4U2R6	128 aa	Known RBP	4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	ORMDL2	Q53FV1	153 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970		Q6JHZ5	121 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	RNF182	Q8N6D2	247 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	FXYD5	Q96DB9	178 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	TPSG1	Q9NRR2	321 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	MRPL35	Q9NZE8	188 aa	Known RBP	4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	TMEM14C	Q9P0S9	112 aa		4.9	□□□□□ -1.63
PTPN9-204	ENST00000564970	KLK5	Q9Y337	293 aa	Predicted RBP	4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms