RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 TMEM78Q5T7P6 136 aa13.2□□□□□ -0.3
PKD1-227ENST00000564313 BAP18Q8IXM2 172 aa13.2□□□□□ -0.3
PKD1-227ENST00000564313 C11orf45Q8TAV5 145 aa13.2□□□□□ -0.3
PKD1-227ENST00000564313 CMTM2Q8TAZ6 248 aa13.2□□□□□ -0.3
PKD1-227ENST00000564313 SUN5Q8TC36 379 aa13.2□□□□□ -0.3
PKD1-227ENST00000564313 TRAV12-2A0A075B6T6 113 aa13.19□□□□□ -0.3
PKD1-227ENST00000564313 UMAD1C9J7I0 102 aa13.19□□□□□ -0.3
PKD1-227ENST00000564313 EIF3GO75821 320 aaKnown RBP eCLIP13.19□□□□□ -0.3
PKD1-227ENST00000564313 RBMY1A1P0DJD3 496 aaKnown RBP13.19□□□□□ -0.3
PKD1-227ENST00000564313 RBMY1CP0DJD4 496 aa13.19□□□□□ -0.3
PKD1-227ENST00000564313 CT45A10P0DMU9 189 aa13.19□□□□□ -0.3
PKD1-227ENST00000564313 TPT1P13693 172 aaKnown RBP13.19□□□□□ -0.3
PKD1-227ENST00000564313 RBMY1FQ15415 496 aaKnown RBP13.19□□□□□ -0.3
PKD1-227ENST00000564313 RRN3P1Q2M238 152 aa13.19□□□□□ -0.3
PKD1-227ENST00000564313 TRBV7-9A0A0J9YWB2 115 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 PGPA6NDG6 321 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 DEFB4AO15263 64 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 PRB4P10163 310 aaPredicted RBP13.18□□□□□ -0.3
PKD1-227ENST00000564313 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 AGPAT4-IT1Q9H0P7 198 aa13.18□□□□□ -0.3
PKD1-227ENST00000564313 IGKV2-40A0A087WW87 121 aaPredicted RBP13.17□□□□□ -0.3
PKD1-227ENST00000564313 NUPR2A6NF83 97 aa13.17□□□□□ -0.3
PKD1-227ENST00000564313 DIRC3C9JPN6 131 aa13.17□□□□□ -0.3
PKD1-227ENST00000564313 IGKV2D-40P01614 121 aaPredicted RBP13.17□□□□□ -0.3
PKD1-227ENST00000564313 NMBP08949 121 aa13.17□□□□□ -0.3
PKD1-227ENST00000564313 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 CXorf65A6NEN9 183 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 H7BYZ3 331 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 CRISP2P16562 243 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 TAS2R60P59551 318 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 ERCC8Q13216 396 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 ZNF726P1Q15940 193 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 EIF5AL1Q6IS14 154 aaKnown RBP13.16□□□□□ -0.3
PKD1-227ENST00000564313 DPPA3Q6W0C5 159 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 SSX7Q7RTT5 188 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 TMED6Q8WW62 240 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 FAM19A4Q96LR4 140 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 LINC01587Q99440 93 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 ZNF492Q9P255 531 aa13.16□□□□□ -0.3
PKD1-227ENST00000564313 LOC102723971A0A1B0GUV8 181 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 A0A1W2PRE2 83 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 ZNF138P52744 262 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 LGALSLQ3ZCW2 172 aaPredicted RBP13.15□□□□□ -0.3
PKD1-227ENST00000564313 GFI1BQ5VTD9 330 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 IQCF2Q8IXL9 164 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 VGLL1Q99990 258 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 NIPSNAP3BQ9BS92 247 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 LENEPQ9Y5L5 61 aa13.15□□□□□ -0.3
PKD1-227ENST00000564313 MAP1LC3B2A6NCE7 125 aa13.14□□□□□ -0.31
PKD1-227ENST00000564313 KLLNB2CW77 178 aa13.14□□□□□ -0.31
PKD1-227ENST00000564313 PMS2P11Q13670 270 aa13.14□□□□□ -0.31
PKD1-227ENST00000564313 NKX6-2Q9C056 277 aaPredicted RBP13.14□□□□□ -0.31
PKD1-227ENST00000564313 MAP1LC3BQ9GZQ8 125 aa13.14□□□□□ -0.31
PKD1-227ENST00000564313 PCLOQ9Y6V0 5065 aa13.14□□□□□ -0.31
PKD1-227ENST00000564313 C7orf71A4D174 169 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 C11orf94C9JXX5 98 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 K7EQM0 130 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 GPX1P07203 203 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 SPART-AS1P0CW21 52 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 NANOS2P60321 138 aaKnown RBP13.13□□□□□ -0.31
PKD1-227ENST00000564313 ZFP69Q49AA0 526 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 ZNF493Q6ZR52 646 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 FRAS1Q86XX4 4008 aa13.13□□□□□ -0.31
PKD1-227ENST00000564313 RAB5CP51148 216 aa13.12□□□□□ -0.31
PKD1-227ENST00000564313 SLC51BQ86UW2 128 aa13.12□□□□□ -0.31
PKD1-227ENST00000564313 C16orf74Q96GX8 76 aa13.12□□□□□ -0.31
PKD1-227ENST00000564313 PYGO2Q9BRQ0 406 aa13.12□□□□□ -0.31
PKD1-227ENST00000564313 RPH3ALQ9UNE2 315 aa13.12□□□□□ -0.31
PKD1-227ENST00000564313 KLK5Q9Y337 293 aaPredicted RBP13.12□□□□□ -0.31
PKD1-227ENST00000564313 FBLL1A6NHQ2 334 aaKnown RBP13.11□□□□□ -0.31
PKD1-227ENST00000564313 ZNF705GA8MUZ8 300 aaPredicted RBP13.11□□□□□ -0.31
PKD1-227ENST00000564313 J3KRW8 73 aa13.11□□□□□ -0.31
PKD1-227ENST00000564313 EMP1P54849 157 aa13.11□□□□□ -0.31
PKD1-227ENST00000564313 SUMO1P63165 101 aaKnown RBP13.11□□□□□ -0.31
PKD1-227ENST00000564313 KIR3DS1Q14943 382 aa13.11□□□□□ -0.31
PKD1-227ENST00000564313 CEMP1Q6PRD7 247 aaPredicted RBP13.11□□□□□ -0.31
PKD1-227ENST00000564313 GOLT1AQ6ZVE7 132 aa13.11□□□□□ -0.31
PKD1-227ENST00000564313 PHLDA1Q8WV24 401 aaPredicted RBP13.11□□□□□ -0.31
PKD1-227ENST00000564313 ARL2-SNX15V9GYD0 113 aa13.11□□□□□ -0.31
PKD1-227ENST00000564313 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 TCRAP04437 139 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 FGF8P55075 233 aaPredicted RBP13.1□□□□□ -0.31
PKD1-227ENST00000564313 CCDC28AQ8IWP9 274 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 ZFAND2AQ8N6M9 145 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 FAM213BQ8TBF2 198 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 TMEM263Q8WUH6 116 aaKnown RBP13.1□□□□□ -0.31
PKD1-227ENST00000564313 MBD3L1Q8WWY6 194 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 DKK2Q9UBU2 259 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 CELA1Q9UNI1 258 aa13.1□□□□□ -0.31
PKD1-227ENST00000564313 YTHDF2Q9Y5A9 579 aaKnown RBP13.1□□□□□ -0.31
PKD1-227ENST00000564313 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 LYRM9A8MSI8 78 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 GGTLC3B5MD39 225 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 HTN1P15515 57 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 FHITP49789 147 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 FAM222AQ5U5X8 452 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 Q8TAT8 98 aa13.09□□□□□ -0.31
PKD1-227ENST00000564313 LINC00467Q9BRT7 94 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms