RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 RNF141Q8WVD5 230 aa14.05□□□□□ -0.16
SHCBP1-203ENST00000564272 ZNF503Q96F45 646 aa14.05□□□□□ -0.16
SHCBP1-203ENST00000564272 C7orf71A4D174 169 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 CBY3A6NI87 242 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 PTTG1O95997 202 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 SLC25A5P05141 298 aaKnown RBP14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 CD300CQ08708 224 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 BTN1A1Q13410 526 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 C15orf53Q8NAA6 179 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 FAM19A4Q96LR4 140 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 VGLL1Q99990 258 aa14.04□□□□□ -0.16
SHCBP1-203ENST00000564272 IGLV2-18A0A075B6J9 118 aa14.03□□□□□ -0.16
SHCBP1-203ENST00000564272 KLLNB2CW77 178 aa14.03□□□□□ -0.16
SHCBP1-203ENST00000564272 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
SHCBP1-203ENST00000564272 UBE2L3P68036 154 aaKnown RBP14.03□□□□□ -0.16
SHCBP1-203ENST00000564272 C9orf47Q6ZRZ4 202 aa14.03□□□□□ -0.16
SHCBP1-203ENST00000564272 NACAE9PAV3 2078 aa14.02□□□□□ -0.16
SHCBP1-203ENST00000564272 RNASE4P34096 147 aaKnown RBP14.02□□□□□ -0.17
SHCBP1-203ENST00000564272 LINC00612Q8N6U2 182 aa14.02□□□□□ -0.17
SHCBP1-203ENST00000564272 PYGO2Q9BRQ0 406 aa14.02□□□□□ -0.17
SHCBP1-203ENST00000564272 SNURFLB1AK76 121 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 NUDT3O95989 172 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 RNF212Q495C1 297 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 KHDC3LQ587J8 217 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 TMEM78Q5T7P6 136 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 PRR9Q5T870 116 aa14.01□□□□□ -0.17
SHCBP1-203ENST00000564272 HECTD4Q9Y4D8 3996 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 GAGE12BA1L429 117 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 ZNF324O75467 553 aaPredicted RBP14□□□□□ -0.17
SHCBP1-203ENST00000564272 GAGE7O76087 117 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 GAGE12FP0CL80 117 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 GAGE12GP0CL81 117 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 GAGE12IP0CL82 117 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 CRISP2P16562 243 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 RANP62826 216 aaKnown RBP14□□□□□ -0.17
SHCBP1-203ENST00000564272 ZFAND2AQ8N6M9 145 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 Q8TAT8 98 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 MED28Q9H204 178 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 Q9H3A6 140 aa14□□□□□ -0.17
SHCBP1-203ENST00000564272 GPX1P07203 203 aa13.99□□□□□ -0.17
SHCBP1-203ENST00000564272 LGALS9BQ3B8N2 356 aa13.99□□□□□ -0.17
SHCBP1-203ENST00000564272 Q6ZQT7 251 aa13.99□□□□□ -0.17
SHCBP1-203ENST00000564272 ZNF492Q9P255 531 aa13.99□□□□□ -0.17
SHCBP1-203ENST00000564272 TAS2R45P59539 299 aa13.98□□□□□ -0.17
SHCBP1-203ENST00000564272 RAB2AP61019 212 aa13.98□□□□□ -0.17
SHCBP1-203ENST00000564272 C11orf72Q8NBR9 251 aa13.98□□□□□ -0.17
SHCBP1-203ENST00000564272 GSN-AS1Q9NRJ2 163 aa13.98□□□□□ -0.17
SHCBP1-203ENST00000564272 RTL8CO15255 209 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 CSN1S1P47710 185 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 ZNF138P52744 262 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 DAZ2Q13117 558 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 ACOT6Q3I5F7 207 aaPredicted RBP13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 Q6ZR54 194 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 Q6ZTI0 123 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 LYPD1Q8N2G4 141 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 EIF4E3Q8N5X7 224 aaKnown RBP13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 ZNF680Q8NEM1 530 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 LINC00467Q9BRT7 94 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 ATG101Q9BSB4 218 aa13.97□□□□□ -0.17
SHCBP1-203ENST00000564272 DNAH2Q9P225 4427 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 NMBP08949 121 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 M6PRP20645 277 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 HOXA5P20719 270 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 OR5I1Q13606 314 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 LINC00336Q6ZUF6 198 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 TMPRSS5Q9H3S3 457 aa13.96□□□□□ -0.17
SHCBP1-203ENST00000564272 TRAV26-1A0A087WT03 109 aa13.95□□□□□ -0.18
SHCBP1-203ENST00000564272 RGS13O14921 159 aa13.95□□□□□ -0.18
SHCBP1-203ENST00000564272 ANXA2RQ3ZCQ2 193 aa13.95□□□□□ -0.18
SHCBP1-203ENST00000564272 Q5BKY6 102 aa13.95□□□□□ -0.18
SHCBP1-203ENST00000564272 TP53TG3Q9ULZ0 132 aa13.95□□□□□ -0.18
SHCBP1-203ENST00000564272 DNAH17Q9UFH2 4485 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 A0A0J9YY99 117 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 RBAKDNA6NC62 111 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 DIRC3C9JPN6 131 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 HMGB3O15347 200 aaKnown RBP13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 HSD17B11Q8NBQ5 300 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 HYLS1Q96M11 299 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 RPH3ALQ9UNE2 315 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 KLF12Q9Y4X4 402 aa13.94□□□□□ -0.18
SHCBP1-203ENST00000564272 FAT2Q9NYQ8 4349 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 IGHV1OR15-1A0A075B7D0 117 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 TRGV1A0A0A0MS02 117 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 A0A1W2PPV4 95 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 FAM3BP58499 235 aaPredicted RBP13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 OR10G4Q8NGN3 311 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 OR10G9Q8NGN4 311 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 OR10G7Q8NGN6 311 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 GNPNAT1Q96EK6 184 aaPredicted RBP13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 AQP10Q96PS8 301 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 OTORQ9NRC9 128 aa13.93□□□□□ -0.18
SHCBP1-203ENST00000564272 TRBV7-9A0A0J9YWB2 115 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 PRSS29PA6NIE9 313 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 GIPP09681 153 aaPredicted RBP13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 TCL1AP56279 114 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 ZNF266Q14584 549 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 PQLC2Q6ZP29 291 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 LINC00588Q9Y4M8 146 aa13.92□□□□□ -0.18
SHCBP1-203ENST00000564272 TRGV2A0A075B6R0 118 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms