RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FAM24BQ8N5W8 94 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 ASCL2Q99929 193 aa16.48■□□□□ 0.23
LINC01960-201ENST00000563759 GCGP01275 180 aa16.47■□□□□ 0.23
LINC01960-201ENST00000563759 TMEM78Q5T7P6 136 aa16.47■□□□□ 0.23
LINC01960-201ENST00000563759 LINC00482Q8N8I6 264 aa16.47■□□□□ 0.23
LINC01960-201ENST00000563759 OR10J6PQ8NGY7 276 aa16.47■□□□□ 0.23
LINC01960-201ENST00000563759 MLST8Q9BVC4 326 aa16.47■□□□□ 0.23
LINC01960-201ENST00000563759 ERVFC1-1P60608 527 aa16.46■□□□□ 0.23
LINC01960-201ENST00000563759 ANAPC16Q96DE5 110 aa16.46■□□□□ 0.23
LINC01960-201ENST00000563759 NDFIP1Q9BT67 221 aa16.46■□□□□ 0.23
LINC01960-201ENST00000563759 SMCO4Q9NRQ5 59 aa16.46■□□□□ 0.23
LINC01960-201ENST00000563759 H7BYZ3 331 aa16.46■□□□□ 0.22
LINC01960-201ENST00000563759 CTDSP1Q9GZU7 261 aa16.46■□□□□ 0.22
LINC01960-201ENST00000563759 TRAV2A0A0B4J234 112 aa16.45■□□□□ 0.22
LINC01960-201ENST00000563759 ZNF705DP0CH99 300 aaPredicted RBP16.45■□□□□ 0.22
LINC01960-201ENST00000563759 ZNF705BP0CI00 300 aaPredicted RBP16.45■□□□□ 0.22
LINC01960-201ENST00000563759 DEFB1P60022 68 aa16.45■□□□□ 0.22
LINC01960-201ENST00000563759 C15orf54Q8N8G6 183 aa16.45■□□□□ 0.22
LINC01960-201ENST00000563759 SPAG8Q99932 426 aaPredicted RBP16.45■□□□□ 0.22
LINC01960-201ENST00000563759 RNASE7Q9H1E1 156 aaKnown RBP16.45■□□□□ 0.22
LINC01960-201ENST00000563759 BIN3Q9NQY0 253 aa16.45■□□□□ 0.22
LINC01960-201ENST00000563759 TRAV25A0A0B4J276 109 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 PPP1R2P9O14990 202 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 SAPCD1Q5SSQ6 148 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 IBA57Q5T440 356 aaKnown RBP16.44■□□□□ 0.22
LINC01960-201ENST00000563759 C9orf47Q6ZRZ4 202 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 OR10G8Q8NGN5 311 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 FBN1P35555 2871 aaKnown RBP16.44■□□□□ 0.22
LINC01960-201ENST00000563759 OR4C46A6NHA9 309 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 F6UB75 175 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 HIST1H1AQ02539 215 aaPredicted RBP16.44■□□□□ 0.22
LINC01960-201ENST00000563759 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.44■□□□□ 0.22
LINC01960-201ENST00000563759 OR8A1Q8NGG7 326 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 PRR25Q96S07 402 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 AGPAT4-IT1Q9H0P7 198 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
LINC01960-201ENST00000563759 CT45A10P0DMU9 189 aa16.43■□□□□ 0.22
LINC01960-201ENST00000563759 C8orf49Q96NF6 230 aa16.43■□□□□ 0.22
LINC01960-201ENST00000563759 GPR61Q9BZJ8 451 aa16.43■□□□□ 0.22
LINC01960-201ENST00000563759 VWFP04275 2813 aa16.43■□□□□ 0.22
LINC01960-201ENST00000563759 ZNF138P52744 262 aa16.42■□□□□ 0.22
LINC01960-201ENST00000563759 C3orf56Q8N813 242 aa16.42■□□□□ 0.22
LINC01960-201ENST00000563759 ZC2HC1AQ96GY0 325 aa16.42■□□□□ 0.22
LINC01960-201ENST00000563759 AGRNO00468 2067 aa16.42■□□□□ 0.22
LINC01960-201ENST00000563759 IZUMO1RA6ND01 250 aa16.42■□□□□ 0.22
LINC01960-201ENST00000563759 NPIPB6E9PJ23 425 aa16.41■□□□□ 0.22
LINC01960-201ENST00000563759 TMEM158Q8WZ71 300 aa16.41■□□□□ 0.22
LINC01960-201ENST00000563759 ZNF747Q9BV97 191 aa16.41■□□□□ 0.22
LINC01960-201ENST00000563759 OSTCQ9NRP0 149 aa16.41■□□□□ 0.22
LINC01960-201ENST00000563759 ZNF492Q9P255 531 aa16.41■□□□□ 0.22
LINC01960-201ENST00000563759 STAB1Q9NY15 2570 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 CXorf65A6NEN9 183 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 IGLV1-51P01701 117 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 C12orf54Q6X4T0 127 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 DAZAP1Q96EP5 407 aaKnown RBP16.4■□□□□ 0.22
LINC01960-201ENST00000563759 LINC00477Q96M19 166 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 URGCP-MRPS24S4R325 110 aa16.4■□□□□ 0.22
LINC01960-201ENST00000563759 EBLN2Q6P2I7 272 aa16.39■□□□□ 0.22
LINC01960-201ENST00000563759 FAM231DQ6ZW35 169 aa16.39■□□□□ 0.22
LINC01960-201ENST00000563759 TUBA4BQ9H853 241 aa16.39■□□□□ 0.21
LINC01960-201ENST00000563759 ZNF256Q9Y2P7 627 aaPredicted RBP16.39■□□□□ 0.21
LINC01960-201ENST00000563759 ZNF705GA8MUZ8 300 aaPredicted RBP16.38■□□□□ 0.21
LINC01960-201ENST00000563759 CD33P20138 364 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 DEFB131AP59861 70 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 SMUG1Q53HV7 270 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 GDF5OSQ5U4N7 250 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 LINC00322Q6ZN03 302 aaPredicted RBP16.38■□□□□ 0.21
LINC01960-201ENST00000563759 NUDT10Q8NFP7 164 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 OR2K2Q8NGT1 345 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 NUDT11Q96G61 164 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 V9GYV3 84 aa16.38■□□□□ 0.21
LINC01960-201ENST00000563759 P01737 135 aa16.37■□□□□ 0.21
LINC01960-201ENST00000563759 PPP1R14DQ9NXH3 145 aa16.37■□□□□ 0.21
LINC01960-201ENST00000563759 GATCO43716 136 aaKnown RBP16.37■□□□□ 0.21
LINC01960-201ENST00000563759 S100PP25815 95 aa16.37■□□□□ 0.21
LINC01960-201ENST00000563759 MAP6D1Q9H9H5 199 aa16.37■□□□□ 0.21
LINC01960-201ENST00000563759 LENEPQ9Y5L5 61 aa16.37■□□□□ 0.21
LINC01960-201ENST00000563759 A0A0J9YX75 114 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 C19orf71A6NCJ1 209 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 FAM162BQ5T6X4 162 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 FOXI2Q6ZQN5 318 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 COX8CQ7Z4L0 72 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 SAV1Q9H4B6 383 aaPredicted RBP16.36■□□□□ 0.21
LINC01960-201ENST00000563759 NOTCH3Q9UM47 2321 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 COL6A5A8TX70 2615 aa16.36■□□□□ 0.21
LINC01960-201ENST00000563759 SHISA2Q6UWI4 295 aa16.35■□□□□ 0.21
LINC01960-201ENST00000563759 KCNIP4Q6PIL6 250 aa16.35■□□□□ 0.21
LINC01960-201ENST00000563759 RPP21Q9H633 154 aaKnown RBP16.35■□□□□ 0.21
LINC01960-201ENST00000563759 SH2D1AO60880 128 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 CA1P00915 261 aaPredicted RBP16.33■□□□□ 0.21
LINC01960-201ENST00000563759 CRIP1P50238 77 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 INSL3P51460 131 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 ELOBQ15370 118 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 C9orf66Q5T8R8 295 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 OR4B1Q8NGF8 309 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 SPATA3Q8NHX4 192 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 IL36BQ9NZH7 164 aa16.33■□□□□ 0.21
LINC01960-201ENST00000563759 J3KRW8 73 aa16.33■□□□□ 0.2
LINC01960-201ENST00000563759 DUSP14O95147 198 aaKnown RBP16.33■□□□□ 0.2
LINC01960-201ENST00000563759 IGKV3-20P01619 116 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms