RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 LINC00305Q7Z4B0 112 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 KRTAP11-1Q8IUC1 163 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 OR5AS1Q8N127 324 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 DRAM1Q8N682 238 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 ZNF645Q8N7E2 425 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 TMEM158Q8WZ71 300 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 MCEEQ96PE7 176 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 CYSTM1Q9H1C7 97 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 ANAPC11Q9NYG5 84 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 HIGD1BQ9P298 99 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 ROBO1Q9Y6N7 1651 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 LRP6O75581 1613 aa2.71□□□□□ -1.98
GDE1-202ENST00000563645 IGHV1-58A0A0C4DH39 117 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 A8MWV9 139 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 INS-IGF2F8WCM5 200 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SYNGR2O43760 224 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SLC25A14O95258 325 aaPredicted RBP2.7□□□□□ -1.98
GDE1-202ENST00000563645 COX5AP20674 150 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 ZNF136P52737 540 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 EFNA4P52798 201 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 LIM2P55344 173 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 HIST1H4AP62805 103 aaKnown RBP2.7□□□□□ -1.98
GDE1-202ENST00000563645 NDPQ00604 133 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 FAM78AQ5JUQ0 283 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 FAM120AOSQ5T036 256 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 PLPP4Q5VZY2 271 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 WDR86Q86TI4 376 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 LINC00596Q86U02 117 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 C6orf223Q8N319 242 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 FAM19A2Q8N3H0 131 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 RPP25LQ8N5L8 163 aaKnown RBP2.7□□□□□ -1.98
GDE1-202ENST00000563645 LINC01555Q8NAE3 123 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 H1FXQ92522 213 aaKnown RBP2.7□□□□□ -1.98
GDE1-202ENST00000563645 SPACA5Q96QH8 159 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 NMNAT3Q96T66 252 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SMIM7Q9BQ49 75 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 PRSS27Q9BQR3 290 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SRXN1Q9BYN0 137 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 LIME1Q9H400 295 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 KIAA1549Q9HCM3 1950 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.7□□□□□ -1.98
GDE1-202ENST00000563645 TOGARAM1Q9Y4F4 1720 aa2.7□□□□□ -1.98
GDE1-202ENST00000563645 SCN2AQ99250 2005 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LMO7Q8WWI1 1683 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 DOT1LQ8TEK3 1739 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 TRAV8-2A0A0B4J237 113 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 TRAV8-4A0A0B4J246 113 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 TRAV17A0A0B4J275 112 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 WI2-2373I1.2A0A1W2PRP0 233 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 FAM168BA1KXE4 195 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LINC01619G3V211 115 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 J3QT63 122 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LGALS9O00182 355 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LY6G6DO95868 133 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 ZNF823P16415 610 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 MYCNOSP40205 109 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 FXYD2P54710 66 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 NPC2P61916 151 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 ZNF816Q0VGE8 651 aaPredicted RBP2.69□□□□□ -1.98
GDE1-202ENST00000563645 CST6Q15828 149 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 ZNF791Q3KP31 576 aaPredicted RBP2.69□□□□□ -1.98
GDE1-202ENST00000563645 ZNF678Q5SXM1 525 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LINC01545Q5VT33 79 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 FAM219BQ5XKK7 198 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 CEMP1Q6PRD7 247 aaPredicted RBP2.69□□□□□ -1.98
GDE1-202ENST00000563645 KTN1-AS1Q86SY8 53 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 LRRC29Q8WV35 223 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 COPS9Q8WXC6 57 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 HDHD3Q9BSH5 251 aaPredicted RBP2.69□□□□□ -1.98
GDE1-202ENST00000563645 DEFB127Q9H1M4 99 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 C11orf68Q9H3H3 251 aaKnown RBP2.69□□□□□ -1.98
GDE1-202ENST00000563645 FAM60AQ9NP50 221 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 CKLFQ9UBR5 152 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 ZNF236Q9UL36 1845 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 ANKRD36A6QL64 1941 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 CD163L1Q9NR16 1453 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 SCN7AQ01118 1682 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 DOCK8Q8NF50 2099 aa2.69□□□□□ -1.98
GDE1-202ENST00000563645 BAZ2BQ9UIF8 2168 aaKnown RBP2.68□□□□□ -1.98
GDE1-202ENST00000563645 RAI1Q7Z5J4 1906 aaPredicted RBP2.68□□□□□ -1.98
GDE1-202ENST00000563645 TRAV8-1A0A0A6YYK1 113 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 TRAV41A0A0B4J266 112 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 F6UB75 175 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 J3QRE1 110 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 ATOX1O00244 68 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 SCGB1C2P0DMR2 95 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CXCL5P42830 114 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 KRTAP10-8P60410 259 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 DAD1P61803 113 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CCL8P80075 99 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 ORMDL2Q53FV1 153 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CENPWQ5EE01 88 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 LGALS9CQ6DKI2 356 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 Q6P435 159 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 C5orf38Q86SI9 138 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 RFESDQ8TAC1 157 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CCL17Q92583 94 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 PAXXQ9BUH6 204 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 CHAC1Q9BUX1 264 aa2.68□□□□□ -1.98
GDE1-202ENST00000563645 IL36BQ9NZH7 164 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms