RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 IL4P05112 153 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 RUSC1-AS1Q66K80 236 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 SYT8Q8NBV8 401 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.12□□□□□ -0.79
CCDC187-201ENST00000563590 OSR1Q8TAX0 266 aaPredicted RBP10.12□□□□□ -0.79
CCDC187-201ENST00000563590 NDUFA4L2Q9NRX3 87 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 IGKV2D-26A0A0A0MRZ7 120 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 TRAV40A0A0B4J280 105 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 CD40P25942 277 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 TTC9CQ8N5M4 171 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 TMEM133Q9H2Q1 129 aa10.12□□□□□ -0.79
CCDC187-201ENST00000563590 IGKV2-40A0A087WW87 121 aaPredicted RBP10.11□□□□□ -0.79
CCDC187-201ENST00000563590 NDUFS7O75251 213 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 IGKV2D-40P01614 121 aaPredicted RBP10.11□□□□□ -0.79
CCDC187-201ENST00000563590 IGHV1-46P01743 117 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 CCDC144NLQ6NUI1 221 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 TMEM75Q8N9X5 138 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 SPAG8Q99932 426 aaPredicted RBP10.11□□□□□ -0.79
CCDC187-201ENST00000563590 C20orf78Q9BR46 151 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 AGRNO00468 2067 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 MRPL51Q4U2R6 128 aaKnown RBP10.11□□□□□ -0.79
CCDC187-201ENST00000563590 SS18L2Q9UHA2 77 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 MTORP42345 2549 aa10.11□□□□□ -0.79
CCDC187-201ENST00000563590 IGKCP01834 107 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 GATA1P15976 413 aaPredicted RBP10.1□□□□□ -0.79
CCDC187-201ENST00000563590 RPEQ96AT9 228 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 SLC25A39Q9BZJ4 359 aaPredicted RBP10.1□□□□□ -0.79
CCDC187-201ENST00000563590 OTORQ9NRC9 128 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 SMIM17P0DL12 118 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 CNTFRP26992 372 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 LGALS9BQ3B8N2 356 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 LGALS9CQ6DKI2 356 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 ZNF502Q8TBZ5 544 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 MYOZ3Q8TDC0 251 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 FBXL15Q9H469 300 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 TMEM8BA6NDV4 472 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 MSRB1Q9NZV6 116 aa10.1□□□□□ -0.79
CCDC187-201ENST00000563590 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 IGKV1D-37A0A075B6S9 117 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 C19orf71A6NCJ1 209 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 FGF6P10767 208 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 RITA1Q96K30 269 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 IGHV3-66A0A0C4DH42 116 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 MYCNOSP40205 109 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 C8orf46Q8TAG6 207 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 TMEM158Q8WZ71 300 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 MLST8Q9BVC4 326 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 PRSS22Q9GZN4 317 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 GFRA4Q9GZZ7 299 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 ZNF492Q9P255 531 aa10.09□□□□□ -0.79
CCDC187-201ENST00000563590 FSTL3O95633 263 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 GLRXP35754 106 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 CT83Q5H943 113 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 SLC25A15Q9Y619 301 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 CSMD1Q96PZ7 3565 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 GLMPQ8WWB7 406 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 EPG5Q9HCE0 2579 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 FAM104BQ5XKR9 115 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 NGBQ9NPG2 151 aa10.08□□□□□ -0.8
CCDC187-201ENST00000563590 NAV2Q8IVL1 2488 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 DPM2O94777 84 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 APOBEC3AP31941 199 aaPredicted RBP10.07□□□□□ -0.8
CCDC187-201ENST00000563590 ATP5IP56385 69 aaPredicted RBP10.07□□□□□ -0.8
CCDC187-201ENST00000563590 LY6DQ14210 128 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 PTH2Q96A98 100 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 ANAPC13Q9BS18 74 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 DKK4Q9UBT3 224 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 SH2D1AO60880 128 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 C3orf36Q3SXR2 165 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 PGPEP1Q9NXJ5 209 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 IGLL5B9A064 214 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 GRNP28799 593 aaKnown RBP10.07□□□□□ -0.8
CCDC187-201ENST00000563590 MC5RP33032 325 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 KLF12Q9Y4X4 402 aa10.07□□□□□ -0.8
CCDC187-201ENST00000563590 VKORC1Q9BQB6 163 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 MRPL35Q9NZE8 188 aaKnown RBP10.06□□□□□ -0.8
CCDC187-201ENST00000563590 SVEP1Q4LDE5 3571 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 SCGB2A1O75556 95 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 GP9P14770 177 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 RPL11P62913 178 aaKnown RBP10.06□□□□□ -0.8
CCDC187-201ENST00000563590 Q6ZS92 163 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 SEM1Q6ZVN7 128 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 FAM215AQ9Y5M1 114 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 OR11H12B2RN74 326 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 CCL21O00585 134 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 IGLV1-44P01699 117 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 C12orf74Q32Q52 190 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 CEND1Q8N111 149 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 OR11H1Q8NG94 326 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 OR11H2Q8NH07 326 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 MRAP2Q96G30 205 aa10.06□□□□□ -0.8
CCDC187-201ENST00000563590 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
CCDC187-201ENST00000563590 CUBNO60494 3623 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 F8W1H4 67 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 LHBP01229 141 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 RPL7P18124 248 aaKnown RBP10.05□□□□□ -0.8
CCDC187-201ENST00000563590 GAFA1Q96PS6 74 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 LINC00527Q9UJ94 153 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 TRAV26-2A0A0B4J265 109 aa10.05□□□□□ -0.8
CCDC187-201ENST00000563590 ZNF785A8K8V0 405 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms