RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 K7EN84 100 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 WIPF1O43516 503 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 ZNF688P0C7X2 276 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 TMEM78Q5T7P6 136 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 C9orf66Q5T8R8 295 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 FAM24BQ8N5W8 94 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 OR8A1Q8NGG7 326 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 ODF3Q96PU9 254 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 NDFIP1Q9BT67 221 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 TMEM242Q9NWH2 141 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 ZNF492Q9P255 531 aa10.41□□□□□ -0.74
CLK3-209ENST00000562670 C7orf77A4D0Y5 90 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 PGPEP1LA6NFU8 196 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 A8MTW9 85 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 PPP1R2P9O14990 202 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 TFPI2P48307 235 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 ZNF138P52744 262 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 CMC4P56277 68 aaPredicted RBP10.4□□□□□ -0.74
CLK3-209ENST00000562670 PSMG4Q5JS54 123 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 FOXI2Q6ZQN5 318 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 FAM231DQ6ZW35 169 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 PRNTQ86SH4 94 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 WFDC3Q8IUB2 231 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 ANAPC16Q96DE5 110 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 PRR25Q96S07 402 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 VGLL1Q99990 258 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 CTDSP1Q9GZU7 261 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 WNK1Q9H4A3 2382 aa10.4□□□□□ -0.74
CLK3-209ENST00000562670 ANK2Q01484 3957 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 A0A0J9YX75 114 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 MT-ND4LP03901 98 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 SFRP2Q96HF1 295 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 AGPAT4-IT1Q9H0P7 198 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 SAV1Q9H4B6 383 aaPredicted RBP10.39□□□□□ -0.75
CLK3-209ENST00000562670 OSTCQ9NRP0 149 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
CLK3-209ENST00000562670 IZUMO1RA6ND01 250 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 CXorf65A6NEN9 183 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 DUSP14O95147 198 aaKnown RBP10.38□□□□□ -0.75
CLK3-209ENST00000562670 BEAN1Q3B7T3 259 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 APRG1Q8IVJ8 170 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 FAM19A4Q96LR4 140 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 SGK494Q96LW2 274 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 CLUHP3Q96NS8 147 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 GPR61Q9BZJ8 451 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 MAP6D1Q9H9H5 199 aa10.38□□□□□ -0.75
CLK3-209ENST00000562670 C19orf71A6NCJ1 209 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 CT45A10P0DMU9 189 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 MGST1P10620 155 aaKnown RBP10.37□□□□□ -0.75
CLK3-209ENST00000562670 CRISP2P16562 243 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 CD33P20138 364 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 ODF3L2Q3SX64 289 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 RNF212Q495C1 297 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 EBLN2Q6P2I7 272 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 Q8TAT8 98 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 TUBA4BQ9H853 241 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 RPS10P5Q9NQ39 176 aa10.37□□□□□ -0.75
CLK3-209ENST00000562670 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 DEFB131AP59861 70 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 HIST1H1AQ02539 215 aaPredicted RBP10.36□□□□□ -0.75
CLK3-209ENST00000562670 ERCC8Q13216 396 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 SMUG1Q53HV7 270 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 CT83Q5H943 113 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 IBA57Q5T440 356 aaKnown RBP10.36□□□□□ -0.75
CLK3-209ENST00000562670 C15orf54Q8N8G6 183 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 NHLRC2Q8NBF2 726 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 AURKAIP1Q9NWT8 199 aaPredicted RBP10.36□□□□□ -0.75
CLK3-209ENST00000562670 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
CLK3-209ENST00000562670 H7BYZ3 331 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 ERVFC1-1P60608 527 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 OR5I1Q13606 314 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 OR4B1Q8NGF8 309 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 OR10G8Q8NGN5 311 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 IMMP2LQ96T52 175 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 SMCO4Q9NRQ5 59 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 VWFP04275 2813 aa10.35□□□□□ -0.75
CLK3-209ENST00000562670 OR11H12B2RN74 326 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 F6UB75 175 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 GDF5OSQ5U4N7 250 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 ZFAND2AQ8N6M9 145 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 C8orf49Q96NF6 230 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 ASCL2Q99929 193 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 V9GYV3 84 aa10.34□□□□□ -0.75
CLK3-209ENST00000562670 KLLNB2CW77 178 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 H3BMM0 161 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 LEPP41159 167 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 DEFB1P60022 68 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 SPATA3Q8NHX4 192 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 RNASE7Q9H1E1 156 aaKnown RBP10.33□□□□□ -0.76
CLK3-209ENST00000562670 COL6A5A8TX70 2615 aa10.33□□□□□ -0.76
CLK3-209ENST00000562670 SCO1O75880 301 aa10.32□□□□□ -0.76
CLK3-209ENST00000562670 P01737 135 aa10.32□□□□□ -0.76
CLK3-209ENST00000562670 PFN1P07737 140 aaKnown RBP10.32□□□□□ -0.76
CLK3-209ENST00000562670 ZNF705DP0CH99 300 aaPredicted RBP10.32□□□□□ -0.76
CLK3-209ENST00000562670 ZNF705BP0CI00 300 aaPredicted RBP10.32□□□□□ -0.76
CLK3-209ENST00000562670 PRB4P10163 310 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms