RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 NOP10Q9NPE3 64 aaKnown RBP12.62□□□□□ -0.39
CMTM3-204ENST00000562357 C7orf71A4D174 169 aa12.61□□□□□ -0.39
CMTM3-204ENST00000562357 ERCC8Q13216 396 aa12.61□□□□□ -0.39
CMTM3-204ENST00000562357 FCN2Q15485 313 aa12.61□□□□□ -0.39
CMTM3-204ENST00000562357 FXYD5Q96DB9 178 aa12.6□□□□□ -0.39
CMTM3-204ENST00000562357 IGKV2-40A0A087WW87 121 aaPredicted RBP12.59□□□□□ -0.39
CMTM3-204ENST00000562357 IGKV2D-40P01614 121 aaPredicted RBP12.59□□□□□ -0.39
CMTM3-204ENST00000562357 GPX1P07203 203 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 ACOT6Q3I5F7 207 aaPredicted RBP12.59□□□□□ -0.39
CMTM3-204ENST00000562357 RNF212Q495C1 297 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 C9orf47Q6ZRZ4 202 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 LYPD1Q8N2G4 141 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 ZNF680Q8NEM1 530 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 ATG101Q9BSB4 218 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 AGPAT4-IT1Q9H0P7 198 aa12.59□□□□□ -0.39
CMTM3-204ENST00000562357 KMT2AQ03164 3969 aa12.58□□□□□ -0.4
CMTM3-204ENST00000562357 A0A1W2PPV4 95 aa12.58□□□□□ -0.4
CMTM3-204ENST00000562357 NMBP08949 121 aa12.58□□□□□ -0.4
CMTM3-204ENST00000562357 RNASE4P34096 147 aaKnown RBP12.58□□□□□ -0.4
CMTM3-204ENST00000562357 RANP62826 216 aaKnown RBP12.58□□□□□ -0.4
CMTM3-204ENST00000562357 ZNF266Q14584 549 aa12.58□□□□□ -0.4
CMTM3-204ENST00000562357 PHYHIPLQ96FC7 376 aa12.58□□□□□ -0.4
CMTM3-204ENST00000562357 KLLNB2CW77 178 aa12.57□□□□□ -0.4
CMTM3-204ENST00000562357 M6PRP20645 277 aa12.57□□□□□ -0.4
CMTM3-204ENST00000562357 FAM74A1Q5RGS3 127 aa12.57□□□□□ -0.4
CMTM3-204ENST00000562357 VPS13DQ5THJ4 4388 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 NUDT3O95989 172 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 CRISP2P16562 243 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 ZNF138P52744 262 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 BTN1A1Q13410 526 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 LINC00336Q6ZUF6 198 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 EIF4E3Q8N5X7 224 aaKnown RBP12.56□□□□□ -0.4
CMTM3-204ENST00000562357 RXFP4Q8TDU9 374 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 ASB13Q8WXK3 278 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 VGLL1Q99990 258 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 Q9H3A6 140 aa12.56□□□□□ -0.4
CMTM3-204ENST00000562357 GAGE12BA1L429 117 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 RGS13O14921 159 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 GAGE7O76087 117 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 GAGE12FP0CL80 117 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 GAGE12GP0CL81 117 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 GAGE12IP0CL82 117 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 FAM3BP58499 235 aaPredicted RBP12.55□□□□□ -0.4
CMTM3-204ENST00000562357 PQLC2Q6ZP29 291 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 CMTM2Q8TAZ6 248 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 FAM19A4Q96LR4 140 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 WFDC1Q9HC57 220 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 ZNF492Q9P255 531 aa12.55□□□□□ -0.4
CMTM3-204ENST00000562357 TRBV7-9A0A0J9YWB2 115 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 RBAKDNA6NC62 111 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 M0R2N4 97 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 CD300CQ08708 224 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 DAZ2Q13117 558 aaKnown RBP12.54□□□□□ -0.4
CMTM3-204ENST00000562357 OR5I1Q13606 314 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 ZNF503Q96F45 646 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 ARPC5LQ9BPX5 153 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 LINC00467Q9BRT7 94 aa12.54□□□□□ -0.4
CMTM3-204ENST00000562357 IGLV2-18A0A075B6J9 118 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 GIPP09681 153 aaPredicted RBP12.53□□□□□ -0.4
CMTM3-204ENST00000562357 CCL18P55774 89 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 LGALS9BQ3B8N2 356 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 ANXA2RQ3ZCQ2 193 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 LINC00612Q8N6U2 182 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 HSD17B11Q8NBQ5 300 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 INO80EQ8NBZ0 244 aaPredicted RBP12.53□□□□□ -0.4
CMTM3-204ENST00000562357 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 OR10G9Q8NGN4 311 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 OR10G7Q8NGN6 311 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 HYLS1Q96M11 299 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 AQP10Q96PS8 301 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 GSN-AS1Q9NRJ2 163 aa12.53□□□□□ -0.4
CMTM3-204ENST00000562357 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
CMTM3-204ENST00000562357 ZNF324O75467 553 aaPredicted RBP12.52□□□□□ -0.41
CMTM3-204ENST00000562357 RAB2AP61019 212 aa12.52□□□□□ -0.41
CMTM3-204ENST00000562357 SOHLH1Q5JUK2 328 aa12.52□□□□□ -0.41
CMTM3-204ENST00000562357 ZFAND2AQ8N6M9 145 aa12.52□□□□□ -0.41
CMTM3-204ENST00000562357 Q8TAT8 98 aa12.52□□□□□ -0.41
CMTM3-204ENST00000562357 GNPNAT1Q96EK6 184 aaPredicted RBP12.52□□□□□ -0.41
CMTM3-204ENST00000562357 IGHV1OR15-1A0A075B7D0 117 aa12.51□□□□□ -0.41
CMTM3-204ENST00000562357 MBP02144 154 aa12.51□□□□□ -0.41
CMTM3-204ENST00000562357 RGS21Q2M5E4 152 aa12.51□□□□□ -0.41
CMTM3-204ENST00000562357 RPH3ALQ9UNE2 315 aa12.51□□□□□ -0.41
CMTM3-204ENST00000562357 TRAV26-1A0A087WT03 109 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 TRGV1A0A0A0MS02 117 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 PGPA6NDG6 321 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 DIRC3C9JPN6 131 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 EIF3GO75821 320 aaKnown RBP eCLIP12.5□□□□□ -0.41
CMTM3-204ENST00000562357 CDC34P49427 236 aaPredicted RBP12.5□□□□□ -0.41
CMTM3-204ENST00000562357 IBA57Q5T440 356 aaKnown RBP12.5□□□□□ -0.41
CMTM3-204ENST00000562357 Q6ZTI0 123 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 PSMG3Q9BT73 122 aaPredicted RBP12.5□□□□□ -0.41
CMTM3-204ENST00000562357 LENEPQ9Y5L5 61 aa12.5□□□□□ -0.41
CMTM3-204ENST00000562357 FXYD6-FXYD2A0A087WZ82 144 aa12.49□□□□□ -0.41
CMTM3-204ENST00000562357 TCL1AP56279 114 aa12.49□□□□□ -0.41
CMTM3-204ENST00000562357 C11orf72Q8NBR9 251 aa12.49□□□□□ -0.41
CMTM3-204ENST00000562357 BORCS7-ASMTA0A0B4J1R7 106 aa12.48□□□□□ -0.41
CMTM3-204ENST00000562357 HMGB3O15347 200 aaKnown RBP12.48□□□□□ -0.41
CMTM3-204ENST00000562357 ATP6V0CP27449 155 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 451.5 ms