RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 NUP35Q8NFH5 326 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 NEU1Q99519 415 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 IZUMO1RA6ND01 250 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 SOCS3O14543 225 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 SPINK4O60575 86 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 EDN2P20800 178 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 Q6ZSV7 163 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 MRPL53Q96EL3 112 aaKnown RBP12.59□□□□□ -0.39
PKD1-225ENST00000562297 PRR25Q96S07 402 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 RHPN1-AS1Q9BWJ2 59 aa12.59□□□□□ -0.39
PKD1-225ENST00000562297 MRPL18Q9H0U6 180 aaKnown RBP12.59□□□□□ -0.39
PKD1-225ENST00000562297 HIVEP2P31629 2446 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 RBAKDNA6NC62 111 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 TMEM256Q8N2U0 113 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 KLHDC1Q8N7A1 406 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 Q8TAT8 98 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 GTSF1Q8WW33 167 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 SMPXQ9UHP9 88 aa12.58□□□□□ -0.4
PKD1-225ENST00000562297 SETD2Q9BYW2 2564 aaPredicted RBP12.58□□□□□ -0.4
PKD1-225ENST00000562297 SETXQ7Z333 2677 aaKnown RBP12.57□□□□□ -0.4
PKD1-225ENST00000562297 GRIFINA4D1Z8 144 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 DAZAP1Q96EP5 407 aaKnown RBP12.57□□□□□ -0.4
PKD1-225ENST00000562297 NAT8BQ9UHF3 227 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 A8MWL6 223 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 NUPR1O60356 82 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 TCTEX1D4Q5JR98 221 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 GNB1LQ9BYB4 327 aa12.57□□□□□ -0.4
PKD1-225ENST00000562297 IGHV4OR15-8A0A075B7B6 117 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 A0A087WW49 117 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 TMEM213A2RRL7 107 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 JOSD1Q15040 202 aaPredicted RBP12.56□□□□□ -0.4
PKD1-225ENST00000562297 SAPCD1Q5SSQ6 148 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 MRPL54Q6P161 138 aaKnown RBP12.56□□□□□ -0.4
PKD1-225ENST00000562297 SMR3AQ99954 134 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 GFRA4Q9GZZ7 299 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 TMEM160Q9NX00 188 aa12.56□□□□□ -0.4
PKD1-225ENST00000562297 SNURFLB1AK76 121 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 ERCC8Q13216 396 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 DNLZQ5SXM8 178 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 TMEM136Q6ZRR5 245 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 TCF24Q7RTU0 167 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 C16orf92Q96LL3 132 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 C20orf173Q96LM9 149 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 NRN1Q9NPD7 142 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 CLEC5AQ9NY25 188 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 UFC1Q9Y3C8 167 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 FAM231BA6NCW3 169 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 A8MWP6 167 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 GZMBP10144 247 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 C18orf65Q6ZTR6 163 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 REC114Q7Z4M0 266 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 WIPF2Q8TF74 440 aaPredicted RBP12.55□□□□□ -0.4
PKD1-225ENST00000562297 TMEM18Q96B42 140 aa12.55□□□□□ -0.4
PKD1-225ENST00000562297 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
PKD1-225ENST00000562297 OR2D3Q8NGH3 330 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 TP53TG3Q9ULZ0 132 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 LGALS9O00182 355 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 CT45A10P0DMU9 189 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 HOXD3P31249 432 aaPredicted RBP12.54□□□□□ -0.4
PKD1-225ENST00000562297 ZNF80P51504 273 aaPredicted RBP12.54□□□□□ -0.4
PKD1-225ENST00000562297 WDR73Q6P4I2 378 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 RASL11AQ6T310 242 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 AGPAT4-IT1Q9H0P7 198 aa12.54□□□□□ -0.4
PKD1-225ENST00000562297 NSD1Q96L73 2696 aaPredicted RBP12.53□□□□□ -0.4
PKD1-225ENST00000562297 A0A1B0GXF2 115 aa12.53□□□□□ -0.4
PKD1-225ENST00000562297 MT-ND6P03923 174 aa12.53□□□□□ -0.4
PKD1-225ENST00000562297 FOXA3P55318 350 aaPredicted RBP12.53□□□□□ -0.4
PKD1-225ENST00000562297 COX19Q49B96 90 aa12.53□□□□□ -0.4
PKD1-225ENST00000562297 C9orf47Q6ZRZ4 202 aa12.53□□□□□ -0.4
PKD1-225ENST00000562297 PRO1933Q9H354 126 aa12.53□□□□□ -0.4
PKD1-225ENST00000562297 SH2D1AO60880 128 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.4
PKD1-225ENST00000562297 SYNJ2BPP57105 145 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 FAM162BQ5T6X4 162 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 GDF5OSQ5U4N7 250 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 RBPMS2Q6ZRY4 209 aaKnown RBP12.52□□□□□ -0.4
PKD1-225ENST00000562297 ATP5L2Q7Z4Y8 100 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 SELENOKQ9Y6D0 94 aa12.52□□□□□ -0.4
PKD1-225ENST00000562297 F2Z2F3 143 aa12.52□□□□□ -0.41
PKD1-225ENST00000562297 CRISP2P16562 243 aa12.52□□□□□ -0.41
PKD1-225ENST00000562297 LINC00310P59036 64 aa12.52□□□□□ -0.41
PKD1-225ENST00000562297 DEFA6Q01524 100 aa12.52□□□□□ -0.41
PKD1-225ENST00000562297 PPP1R14DQ9NXH3 145 aa12.52□□□□□ -0.41
PKD1-225ENST00000562297 HIVEP1P15822 2718 aa12.51□□□□□ -0.41
PKD1-225ENST00000562297 RAB4BP61018 213 aa12.51□□□□□ -0.41
PKD1-225ENST00000562297 RPL11P62913 178 aaKnown RBP12.51□□□□□ -0.41
PKD1-225ENST00000562297 DEFB136Q30KP8 78 aa12.51□□□□□ -0.41
PKD1-225ENST00000562297 HLA-DQA1P01909 254 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 ZNF138P52744 262 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 SCGB2A2Q13296 93 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 KLF5Q13887 457 aaPredicted RBP12.5□□□□□ -0.41
PKD1-225ENST00000562297 ZNF575Q86XF7 245 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 C4orf3Q8WVX3 66 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 PGLYRP4Q96LB8 373 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 NDFIP1Q9BT67 221 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 LY6G6DO95868 133 aa12.5□□□□□ -0.41
PKD1-225ENST00000562297 KIAA1644Q3SXP7 199 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms