RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 RNF223E7ERA6 249 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 RPS20P60866 119 aaKnown RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 RNASEKQ6P5S7 137 aaKnown RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 FAM19A2Q8N3H0 131 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 TPPP3Q9BW30 176 aa7.52□□□□□ -1.21
SMG1-205ENST00000561947 BEX4Q9NWD9 120 aaPredicted RBP7.52□□□□□ -1.21
SMG1-205ENST00000561947 CR1P17927 2039 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 A0A0G2JLM5 398 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 HSBP1O75506 76 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 NTF3P20783 257 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 KRTDAPP60985 99 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 SRSF2Q01130 221 aaKnown RBP7.51□□□□□ -1.21
SMG1-205ENST00000561947 DEFA6Q01524 100 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 OR4X2Q8NGF9 303 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 ANKRD17O75179 2603 aaKnown RBP7.51□□□□□ -1.21
SMG1-205ENST00000561947 LYZL1Q6UWQ5 148 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 URB1-AS1Q96HZ7 61 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 CLEC5AQ9NY25 188 aa7.51□□□□□ -1.21
SMG1-205ENST00000561947 CELSR2Q9HCU4 2923 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 FBN2P35556 2912 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 SMAD7O15105 426 aaKnown RBP7.5□□□□□ -1.21
SMG1-205ENST00000561947 IGHV4-31P0DP07 118 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 DEFB113Q30KQ7 82 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 LCNL1Q6ZST4 164 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 C9orf139Q6ZV77 190 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 FAM208BQ5VWN6 2430 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 KIR2DL5BA0A0G2JN68 375 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 KIR2DL5BA0A0G2JPC4 375 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 FABP5P3A8MUU1 101 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 FSHBP01225 129 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 FAM209BQ5JX69 171 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 ZNF493Q6ZR52 646 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 IL17RELQ6ZVW7 336 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 KIR2DL5AQ8N109 375 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 LRRC75A-AS1Q8N1F1 130 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 Q8N976 141 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 C16orf92Q96LL3 132 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 NPFFR1Q9GZQ6 430 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 AGPAT4-IT1Q9H0P7 198 aa7.5□□□□□ -1.21
SMG1-205ENST00000561947 M0R2Z0 102 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 CTRLP40313 264 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 Q5PR19 223 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 REC114Q7Z4M0 266 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 CHCHD1Q96BP2 118 aaKnown RBP7.49□□□□□ -1.21
SMG1-205ENST00000561947 C14orf144Q96I85 54 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 TMEM238LA0A1B0GVL6 79 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 C3orf79P0CE67 100 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 IGLC6P0CF74 106 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 ZNF138P52744 262 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 C9orf47Q6ZRZ4 202 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 FER1L6-AS1Q8NA97 138 aa7.49□□□□□ -1.21
SMG1-205ENST00000561947 M0QZ24 198 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 LINC01559Q495D7 138 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 GPHB5Q86YW7 130 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 PSMG3-AS1Q96PY0 264 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 CSMD2Q7Z408 3487 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 CSPG4Q6UVK1 2322 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 TMEM213A2RRL7 107 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 FAM181BA6NEQ2 426 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 A6NJY4 79 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 ORM1P02763 201 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 PSMB8P28062 276 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 DMRTA1Q5VZB9 504 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 ZNF575Q86XF7 245 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 C20orf173Q96LM9 149 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 PPP1R14DQ9NXH3 145 aa7.48□□□□□ -1.21
SMG1-205ENST00000561947 IGHV7-4-1A0A0J9YVY3 117 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 SOCS3O14543 225 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 HIST1H1AQ02539 215 aaPredicted RBP7.47□□□□□ -1.21
SMG1-205ENST00000561947 NDUFAF3Q9BU61 184 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 PEF1Q9UBV8 284 aaKnown RBP7.47□□□□□ -1.21
SMG1-205ENST00000561947 VPREB3Q9UKI3 123 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 TMEM89A2RUT3 159 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 LINC00614P0C842 121 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 TDRG1Q3Y452 100 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 Q6YL49 198 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 ZNF738Q8NE65 137 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 VAMP8Q9BV40 100 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 LRRK2Q5S007 2527 aa7.47□□□□□ -1.21
SMG1-205ENST00000561947 PRRC2AP48634 2157 aaKnown RBP7.47□□□□□ -1.21
SMG1-205ENST00000561947 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 MUC21Q5SSG8 566 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 FAM104BQ5XKR9 115 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 C20orf144Q9BQM9 153 aa7.46□□□□□ -1.21
SMG1-205ENST00000561947 DAZ1Q9NQZ3 744 aaKnown RBP7.46□□□□□ -1.21
SMG1-205ENST00000561947 SSTP61278 116 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 TM4SF20Q53R12 229 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 CYB5R2Q6BCY4 276 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 Q96MF0 132 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 RHPN1-AS1Q9BWJ2 59 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 CNFNQ9BYD5 112 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 U3KQK5 164 aa7.46□□□□□ -1.22
SMG1-205ENST00000561947 K7EMT4 169 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 OVOL1O14753 267 aa7.45□□□□□ -1.22
SMG1-205ENST00000561947 RAB4AP20338 218 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms