RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 A6NN06 94 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 H0YJX3 145 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 PPYP01298 95 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 MT-ND6P03923 174 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 CCL4P13236 92 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 RPL7P18124 248 aaKnown RBP0.39□□□□□ -2.35
CHD9-204ENST00000561869 RPS3P23396 243 aaKnown RBP eCLIP0.39□□□□□ -2.35
CHD9-204ENST00000561869 NDUFA6P56556 154 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 MAXP61244 160 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 RPS28P62857 69 aaKnown RBP0.39□□□□□ -2.35
CHD9-204ENST00000561869 GLIPR1L1Q6UWM5 242 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 LINC00299Q6ZSB3 139 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 LINC00305Q7Z4B0 112 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 ZGRF1Q86YA3 2104 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 MORN4Q8NDC4 146 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 OR5H6Q8NGV6 325 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 NAT14Q8WUY8 206 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 PRELID3AQ96N28 172 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 CCDC115Q96NT0 180 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 LXNQ9BS40 222 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 NDUFAF1Q9Y375 327 aa0.39□□□□□ -2.35
CHD9-204ENST00000561869 DLC1Q96QB1 1528 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 EML5Q05BV3 1969 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 USP54Q70EL1 1684 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 A2MP01023 1474 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 TRAV13-1A0A0B4J241 112 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 LOC107984640A0A0U1RRK4 108 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 GNG14A0A1W2PPG7 69 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 A0A1W2PPM0 123 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 H3BMG7 143 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 IGLV3-1P01715 115 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 TRACP01848 142 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 SAA1P0DJI8 122 aaPredicted RBP0.38□□□□□ -2.35
CHD9-204ENST00000561869 TPT1P13693 172 aaKnown RBP0.38□□□□□ -2.35
CHD9-204ENST00000561869 PDE6GP18545 87 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 SRP9P49458 86 aaKnown RBP0.38□□□□□ -2.35
CHD9-204ENST00000561869 DIAPH2-AS1Q14236 149 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 SPATA45Q537H7 98 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 SAMD13Q5VXD3 122 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 IZUMO2Q6UXV1 221 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 TAC4Q86UU9 113 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 OR10AC1Q8NH08 325 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 SKA2Q8WVK7 121 aaPredicted RBP0.38□□□□□ -2.35
CHD9-204ENST00000561869 NIT2Q9NQR4 276 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 CBLN4Q9NTU7 201 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 GINS2Q9Y248 185 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 MUC5ACP98088 5654 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 WDR97A6NE52 1622 aa0.38□□□□□ -2.35
CHD9-204ENST00000561869 FER1L6Q2WGJ9 1857 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 ASH1LQ9NR48 2969 aaKnown RBP0.37□□□□□ -2.35
CHD9-204ENST00000561869 CITO14578 2027 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 MED23Q9ULK4 1368 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 A0A1B0GX51 115 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 TSTD3H0UI37 97 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 IGHV3-30P01768 117 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 IGHV3-30-5P0DP03 117 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 S100GP29377 79 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 RPL22P35268 128 aaKnown RBP0.37□□□□□ -2.35
CHD9-204ENST00000561869 FOXA3P55318 350 aaPredicted RBP0.37□□□□□ -2.35
CHD9-204ENST00000561869 DR1Q01658 176 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 VMA21Q3ZAQ7 101 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 CCSMST1Q4G0I0 132 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 CASC2Q6XLA1 102 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 TMEM229BQ8NBD8 167 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 OR5A2Q8NGI9 324 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 OR5AK2Q8NH90 309 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 CLEC2BQ92478 149 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 NABP2Q9BQ15 211 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 WFDC10AQ9H1F0 79 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 TRAPPC2LQ9UL33 140 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 HSPB11Q9Y547 144 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 MPC1Q9Y5U8 109 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 FANCMQ8IYD8 2048 aa0.37□□□□□ -2.35
CHD9-204ENST00000561869 FSIP2Q5CZC0 6907 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 ZFC3H1O60293 1989 aaKnown RBP0.36□□□□□ -2.35
CHD9-204ENST00000561869 A0A096LPI6 279 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 LOC107986453A0A1B0GWG9 222 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 C5orf58C9J3I9 102 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 K7EIL1 84 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 CD14P08571 375 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 CRYGSP22914 178 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 ASB16-AS1Q495Z4 193 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 OCIAD2Q56VL3 154 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 Q5XG85 94 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 KRTAP19-3Q7Z4W3 81 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 TEX29Q8N6K0 151 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 TMEM35BQ8NCS4 154 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 OR51A4Q8NGJ6 313 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 GRPEL2Q8TAA5 225 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 CIB3Q96Q77 187 aaPredicted RBP0.36□□□□□ -2.35
CHD9-204ENST00000561869 LIMD2Q9BT23 127 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 C19orf12Q9NSK7 152 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 KIAA1549LQ6ZVL6 1849 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 KNTC1P50748 2209 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 TANC2Q9HCD6 1990 aa0.36□□□□□ -2.35
CHD9-204ENST00000561869 DSTQ03001 7570 aaKnown RBP0.35□□□□□ -2.35
CHD9-204ENST00000561869 ZNF462Q96JM2 2506 aa0.35□□□□□ -2.35
CHD9-204ENST00000561869 ANKRD30AQ9BXX3 1397 aa0.35□□□□□ -2.35
CHD9-204ENST00000561869 PTPRDP23468 1912 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms