RNA–Protein interactions for RNA: ENST00000561638.1

TMEM249-201, Transcript of transmembrane protein 249, humanhuman

TSL 2

Gene TMEM249, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-201ENST00000561638 LYPD6BQ8NI32 183 aa17.37■□□□□ 0.37
TMEM249-201ENST00000561638 PPP1R2P9O14990 202 aa17.36■□□□□ 0.37
TMEM249-201ENST00000561638 CSN1S1P47710 185 aa17.36■□□□□ 0.37
TMEM249-201ENST00000561638 SUMO1P63165 101 aaKnown RBP17.36■□□□□ 0.37
TMEM249-201ENST00000561638 APRG1Q8IVJ8 170 aa17.36■□□□□ 0.37
TMEM249-201ENST00000561638 NBEAL1Q6ZS30 2694 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 CXorf65A6NEN9 183 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 ZNF705FA8MVS1 300 aaPredicted RBP17.35■□□□□ 0.37
TMEM249-201ENST00000561638 GGTLC3B5MD39 225 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 PRB4P10163 310 aaPredicted RBP17.35■□□□□ 0.37
TMEM249-201ENST00000561638 HAGHQ16775 308 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 RPUSD4Q96CM3 377 aaKnown RBP17.35■□□□□ 0.37
TMEM249-201ENST00000561638 RPH3ALQ9UNE2 315 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 ARL2-SNX15V9GYD0 113 aa17.35■□□□□ 0.37
TMEM249-201ENST00000561638 SLC25A5P05141 298 aaKnown RBP17.35■□□□□ 0.37
TMEM249-201ENST00000561638 PYY3Q5JQD4 70 aa17.34■□□□□ 0.37
TMEM249-201ENST00000561638 FAM110AQ9BQ89 295 aa17.34■□□□□ 0.37
TMEM249-201ENST00000561638 WFDC10AQ9H1F0 79 aa17.34■□□□□ 0.37
TMEM249-201ENST00000561638 TCAPO15273 167 aa17.33■□□□□ 0.37
TMEM249-201ENST00000561638 BCL2P10415 239 aa17.33■□□□□ 0.37
TMEM249-201ENST00000561638 C5orf17Q8NAS9 161 aa17.33■□□□□ 0.37
TMEM249-201ENST00000561638 MRPL53Q96EL3 112 aaKnown RBP17.33■□□□□ 0.37
TMEM249-201ENST00000561638 NEU1Q99519 415 aa17.33■□□□□ 0.37
TMEM249-201ENST00000561638 A0A087WWC5 75 aa17.33■□□□□ 0.36
TMEM249-201ENST00000561638 C11orf94C9JXX5 98 aa17.33■□□□□ 0.36
TMEM249-201ENST00000561638 ATP5G3P48201 142 aa17.33■□□□□ 0.36
TMEM249-201ENST00000561638 DEFB1P60022 68 aa17.33■□□□□ 0.36
TMEM249-201ENST00000561638 EBLN2Q6P2I7 272 aa17.33■□□□□ 0.36
TMEM249-201ENST00000561638 F6UB75 175 aa17.32■□□□□ 0.36
TMEM249-201ENST00000561638 ACTL10Q5JWF8 245 aa17.32■□□□□ 0.36
TMEM249-201ENST00000561638 KPRPQ5T749 579 aaPredicted RBP17.32■□□□□ 0.36
TMEM249-201ENST00000561638 TAGLN2P37802 199 aaKnown RBP17.31■□□□□ 0.36
TMEM249-201ENST00000561638 PMS2P11Q13670 270 aa17.31■□□□□ 0.36
TMEM249-201ENST00000561638 DEFB125Q8N687 156 aa17.31■□□□□ 0.36
TMEM249-201ENST00000561638 EIF5A2Q9GZV4 153 aaKnown RBP17.31■□□□□ 0.36
TMEM249-201ENST00000561638 SLC35B3Q9H1N7 401 aa17.31■□□□□ 0.36
TMEM249-201ENST00000561638 C19orf73Q9NVV2 129 aa17.31■□□□□ 0.36
TMEM249-201ENST00000561638 KNCNA6PVL3 124 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 GNG5P63218 68 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 FOXI2Q6ZQN5 318 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 VAX2Q9UIW0 290 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 RBFOX3A6NFN3 312 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 MEF2BQ02080 365 aaPredicted RBP17.3■□□□□ 0.36
TMEM249-201ENST00000561638 HIST1H1AQ02539 215 aaPredicted RBP17.3■□□□□ 0.36
TMEM249-201ENST00000561638 MRPL52Q86TS9 123 aaKnown RBP17.3■□□□□ 0.36
TMEM249-201ENST00000561638 OR10J6PQ8NGY7 276 aa17.3■□□□□ 0.36
TMEM249-201ENST00000561638 PRAC2D3DTV9 90 aa17.29■□□□□ 0.36
TMEM249-201ENST00000561638 PRB2P02812 416 aaPredicted RBP17.29■□□□□ 0.36
TMEM249-201ENST00000561638 ZNF705DP0CH99 300 aaPredicted RBP17.29■□□□□ 0.36
TMEM249-201ENST00000561638 ZNF705BP0CI00 300 aaPredicted RBP17.29■□□□□ 0.36
TMEM249-201ENST00000561638 RPS10P46783 165 aaKnown RBP17.29■□□□□ 0.36
TMEM249-201ENST00000561638 Q8N1Y9 231 aa17.29■□□□□ 0.36
TMEM249-201ENST00000561638 OR8A1Q8NGG7 326 aa17.29■□□□□ 0.36
TMEM249-201ENST00000561638 EPDR1Q9UM22 224 aa17.29■□□□□ 0.36
TMEM249-201ENST00000561638 NDUFA6P56556 154 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 GDF5OSQ5U4N7 250 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 STHQ8IWL8 128 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 RARRES2Q99969 163 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 TXNDC17Q9BRA2 123 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 IGKV2-40A0A087WW87 121 aaPredicted RBP17.28■□□□□ 0.36
TMEM249-201ENST00000561638 LOC102723971A0A1B0GUV8 181 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 DIRC3C9JPN6 131 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 F6UZH7 168 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 K7EQM0 130 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 IGKV2D-40P01614 121 aaPredicted RBP17.28■□□□□ 0.36
TMEM249-201ENST00000561638 GOLT1AQ6ZVE7 132 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 OR4B1Q8NGF8 309 aa17.28■□□□□ 0.36
TMEM249-201ENST00000561638 A0A0J9YX75 114 aa17.27■□□□□ 0.35
TMEM249-201ENST00000561638 TCRAP04437 139 aa17.27■□□□□ 0.35
TMEM249-201ENST00000561638 NUTF2P61970 127 aaKnown RBP17.27■□□□□ 0.35
TMEM249-201ENST00000561638 OR10D4PQ8NGN7 298 aa17.27■□□□□ 0.35
TMEM249-201ENST00000561638 ATG101Q9BSB4 218 aa17.27■□□□□ 0.35
TMEM249-201ENST00000561638 SRD5A3Q9H8P0 318 aa17.27■□□□□ 0.35
TMEM249-201ENST00000561638 IGKV3-20P01619 116 aa17.26■□□□□ 0.35
TMEM249-201ENST00000561638 HLA-DRB4P13762 266 aa17.26■□□□□ 0.35
TMEM249-201ENST00000561638 HLA-DRB4X5D2U9 266 aa17.26■□□□□ 0.35
TMEM249-201ENST00000561638 B4DEV8 164 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 PEX7O00628 323 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 CNN1P51911 297 aaKnown RBP17.25■□□□□ 0.35
TMEM249-201ENST00000561638 CYB561D1Q8N8Q1 229 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 NDUFAF3Q9BU61 184 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 AURKAIP1Q9NWT8 199 aaPredicted RBP17.25■□□□□ 0.35
TMEM249-201ENST00000561638 PDE6DO43924 150 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 DUSP14O95147 198 aaKnown RBP17.25■□□□□ 0.35
TMEM249-201ENST00000561638 ZNF674Q2M3X9 581 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 ZNF506Q5JVG8 444 aa17.25■□□□□ 0.35
TMEM249-201ENST00000561638 SERTM2A0A1B0GWG4 89 aa17.24■□□□□ 0.35
TMEM249-201ENST00000561638 TMEM78Q5T7P6 136 aa17.24■□□□□ 0.35
TMEM249-201ENST00000561638 SCO2A0A1W2PP80 73 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 H3BMM0 161 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 IGHV4-30-4P0DP06 118 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 SOHLH1Q5JUK2 328 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 ISOC2Q96AB3 205 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 VGLL1Q99990 258 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 RBAKDNA6NC62 111 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 RPL35AP18077 110 aaKnown RBP17.23■□□□□ 0.35
TMEM249-201ENST00000561638 ERCC8Q13216 396 aa17.23■□□□□ 0.35
TMEM249-201ENST00000561638 AGRNO00468 2067 aa17.22■□□□□ 0.35
TMEM249-201ENST00000561638 TRAV8-1A0A0A6YYK1 113 aa17.22■□□□□ 0.35
TMEM249-201ENST00000561638 AKR1C3P42330 323 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms