RNA–Protein interactions for RNA: ENST00000561610.1

PPP4C-202, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4C, Length 1,333 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-202ENST00000561610 IGKV2D-40P01614 121 aaPredicted RBP13.58□□□□□ -0.24
PPP4C-202ENST00000561610 AMBPP02760 352 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 LYPD1Q8N2G4 141 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 FAM213BQ8TBF2 198 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 PCNPQ8WW12 178 aaKnown RBP13.58□□□□□ -0.24
PPP4C-202ENST00000561610 TMED6Q8WW62 240 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 OTORQ9NRC9 128 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 TMEM167BQ9NRX6 74 aa13.58□□□□□ -0.24
PPP4C-202ENST00000561610 MAP1LC3B2A6NCE7 125 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 DEFB4AO15263 64 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 INSP01308 110 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 ZNF726P1Q15940 193 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 MAP1LC3BQ9GZQ8 125 aa13.57□□□□□ -0.24
PPP4C-202ENST00000561610 A0A1B0GV50 99 aa13.56□□□□□ -0.24
PPP4C-202ENST00000561610 SLC25A5P05141 298 aaKnown RBP13.56□□□□□ -0.24
PPP4C-202ENST00000561610 TSPOP30536 169 aa13.56□□□□□ -0.24
PPP4C-202ENST00000561610 TMEM78Q5T7P6 136 aa13.56□□□□□ -0.24
PPP4C-202ENST00000561610 CSNK1G2-AS1Q8NCQ2 148 aa13.56□□□□□ -0.24
PPP4C-202ENST00000561610 RXFP4Q8TDU9 374 aa13.56□□□□□ -0.24
PPP4C-202ENST00000561610 UMAD1C9J7I0 102 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 NPIPB6E9PJ23 425 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 LEPP41159 167 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 FHITP49789 147 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 UBE2G2P60604 165 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 IGF2BP2-AS1Q96M15 143 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 TMPRSS5Q9H3S3 457 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 EDA2RQ9HAV5 297 aa13.55□□□□□ -0.24
PPP4C-202ENST00000561610 A8MTW9 85 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 SCO1O75880 301 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 CT45A10P0DMU9 189 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 CDKN1BP46527 198 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 SVBPQ8N300 66 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.54□□□□□ -0.24
PPP4C-202ENST00000561610 VGLL1Q99990 258 aa13.54□□□□□ -0.24
PPP4C-202ENST00000561610 IGHV4-28A0A0C4DH34 117 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 MIFP14174 115 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 SFT2D1Q8WV19 159 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 LINC01587Q99440 93 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 AGPAT4-IT1Q9H0P7 198 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 PLA2G2EQ9NZK7 142 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 X6R8D5 127 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 TENM2Q9NT68 2774 aa13.53□□□□□ -0.24
PPP4C-202ENST00000561610 ZNF705EA8MWA4 302 aaPredicted RBP13.52□□□□□ -0.25
PPP4C-202ENST00000561610 DIRC3C9JPN6 131 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 HBE1P02100 147 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 HTN1P15515 57 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 EMP1P54849 157 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 SUMO1P63165 101 aaKnown RBP13.52□□□□□ -0.25
PPP4C-202ENST00000561610 GNG5P63218 68 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 BTN1A1Q13410 526 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 MUC7Q8TAX7 377 aa13.52□□□□□ -0.25
PPP4C-202ENST00000561610 CRXO43186 299 aaPredicted RBP13.51□□□□□ -0.25
PPP4C-202ENST00000561610 APOC3P02656 99 aa13.51□□□□□ -0.25
PPP4C-202ENST00000561610 ZFAND6Q6FIF0 208 aa13.51□□□□□ -0.25
PPP4C-202ENST00000561610 GOLT1AQ6ZVE7 132 aa13.51□□□□□ -0.25
PPP4C-202ENST00000561610 C1orf158Q8N1D5 194 aa13.51□□□□□ -0.25
PPP4C-202ENST00000561610 Q8TAT8 98 aa13.51□□□□□ -0.25
PPP4C-202ENST00000561610 GPX1P07203 203 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 H2AFB1P0C5Y9 115 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 BLOC1S1P78537 153 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 PMS2P11Q13670 270 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 KIR3DS1Q14943 382 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 DPPA3Q6W0C5 159 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 C9orf47Q6ZRZ4 202 aa13.5□□□□□ -0.25
PPP4C-202ENST00000561610 NKX6-2Q9C056 277 aaPredicted RBP13.5□□□□□ -0.25
PPP4C-202ENST00000561610 DNAH1Q9P2D7 4330 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 TRAV12-3A0A0B4J271 114 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 ZNF705GA8MUZ8 300 aaPredicted RBP13.49□□□□□ -0.25
PPP4C-202ENST00000561610 RNASE4P34096 147 aaKnown RBP13.49□□□□□ -0.25
PPP4C-202ENST00000561610 ZNF138P52744 262 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 RRN3P1Q2M238 152 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 CASC10Q5T4H9 136 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 ZNF705AQ6ZN79 300 aaPredicted RBP13.49□□□□□ -0.25
PPP4C-202ENST00000561610 Q8NAQ8 132 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 CLRN3Q8NCR9 226 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 IL17DQ8TAD2 202 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 ODF3Q96PU9 254 aa13.49□□□□□ -0.25
PPP4C-202ENST00000561610 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 K7EQM0 130 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 SNAPINO95295 136 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 RBMY1A1P0DJD3 496 aaKnown RBP13.48□□□□□ -0.25
PPP4C-202ENST00000561610 RBMY1CP0DJD4 496 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 FLI1Q01543 452 aaPredicted RBP13.48□□□□□ -0.25
PPP4C-202ENST00000561610 RBMY1FQ15415 496 aaKnown RBP13.48□□□□□ -0.25
PPP4C-202ENST00000561610 CST9LP1Q5W188 147 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 C5orf17Q8NAS9 161 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 NIPSNAP3BQ9BS92 247 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 C11orf68Q9H3H3 251 aaKnown RBP13.48□□□□□ -0.25
PPP4C-202ENST00000561610 ZNF492Q9P255 531 aa13.48□□□□□ -0.25
PPP4C-202ENST00000561610 CARHSP1Q9Y2V2 147 aaKnown RBP13.48□□□□□ -0.25
PPP4C-202ENST00000561610 LCE6AA0A183 80 aa13.47□□□□□ -0.25
PPP4C-202ENST00000561610 LOC102723971A0A1B0GUV8 181 aa13.47□□□□□ -0.25
PPP4C-202ENST00000561610 TMEM218A2RU14 115 aa13.47□□□□□ -0.25
PPP4C-202ENST00000561610 RBAKDNA6NC62 111 aa13.47□□□□□ -0.25
PPP4C-202ENST00000561610 CXorf65A6NEN9 183 aa13.47□□□□□ -0.25
PPP4C-202ENST00000561610 SMIM9A6NGZ8 99 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms