RNA–Protein interactions for RNA: ENST00000561557.1

LINC00566-201, long intergenic non-protein coding RNA 566, humanhuman

TSL 1 (best) BASIC

Gene LINC00566, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00566-201ENST00000561557 SLC35B3Q9H1N7 401 aa6.96□□□□□ -1.3
LINC00566-201ENST00000561557 Q9H3A6 140 aa6.96□□□□□ -1.3
LINC00566-201ENST00000561557 TMEM167BQ9NRX6 74 aa6.96□□□□□ -1.3
LINC00566-201ENST00000561557 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
LINC00566-201ENST00000561557 COL7A1Q02388 2944 aa6.96□□□□□ -1.3
LINC00566-201ENST00000561557 TRBV7-9A0A0J9YWB2 115 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 A0A0J9YWU9 116 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 TMEM189A5PLL7 270 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 PRAC2D3DTV9 90 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 M0R3E3 92 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 SLC25A5P05141 298 aaKnown RBP6.95□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF705DP0CH99 300 aaPredicted RBP6.95□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF705BP0CI00 300 aaPredicted RBP6.95□□□□□ -1.3
LINC00566-201ENST00000561557 LEPP41159 167 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 FXYD7P58549 80 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 RANP62826 216 aaKnown RBP6.95□□□□□ -1.3
LINC00566-201ENST00000561557 EIF5AL1Q6IS14 154 aaKnown RBP6.95□□□□□ -1.3
LINC00566-201ENST00000561557 C9orf47Q6ZRZ4 202 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 BAP18Q8IXM2 172 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 TMEM256Q8N2U0 113 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 EXOC3-AS1Q8N2X6 119 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 STOML3Q8TAV4 291 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 PHYHIPLQ96FC7 376 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 OTORQ9NRC9 128 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 X6R8D5 127 aa6.95□□□□□ -1.3
LINC00566-201ENST00000561557 hCG_2014768A0A024R1R8 64 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 PGPA6NDG6 321 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 CRXO43186 299 aaPredicted RBP6.94□□□□□ -1.3
LINC00566-201ENST00000561557 INSP01308 110 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 NMBP08949 121 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 ARL14EPLP0DKL9 152 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 TPT1P13693 172 aaKnown RBP6.94□□□□□ -1.3
LINC00566-201ENST00000561557 GCHFRP30047 84 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 SPINK13Q1W4C9 94 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 LGALSLQ3ZCW2 172 aaPredicted RBP6.94□□□□□ -1.3
LINC00566-201ENST00000561557 DPPA3Q6W0C5 159 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 C1orf158Q8N1D5 194 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 Q8NAQ8 132 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 CMTM2Q8TAZ6 248 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 NBEAL2Q6ZNJ1 2754 aa6.94□□□□□ -1.3
LINC00566-201ENST00000561557 SERTM2A0A1B0GWG4 89 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 A0A1W2PRE2 83 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 DIRC3C9JPN6 131 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 M0R2Z0 102 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 HMGB3O15347 200 aaKnown RBP6.93□□□□□ -1.3
LINC00566-201ENST00000561557 HBE1P02100 147 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 TMEM78Q5T7P6 136 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 SLC51BQ86UW2 128 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 TMED6Q8WW62 240 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 TMEM208Q9BTX3 173 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
LINC00566-201ENST00000561557 AGPAT4-IT1Q9H0P7 198 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 LENEPQ9Y5L5 61 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 STAB2Q8WWQ8 2551 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 TENM3Q9P273 2699 aa6.93□□□□□ -1.3
LINC00566-201ENST00000561557 IGHV4-28A0A0C4DH34 117 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 TEX48A0A1B0GUV7 120 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 H3BS24 57 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 RBMY1A1P0DJD3 496 aaKnown RBP6.92□□□□□ -1.3
LINC00566-201ENST00000561557 RBMY1CP0DJD4 496 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 CT45A10P0DMU9 189 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 CRISP2P16562 243 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 RAB5CP51148 216 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 RBMY1FQ15415 496 aaKnown RBP6.92□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF726P1Q15940 193 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 RRN3P1Q2M238 152 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 ZFP69Q49AA0 526 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 MBD3L1Q8WWY6 194 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 FAM19A4Q96LR4 140 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF492Q9P255 531 aa6.92□□□□□ -1.3
LINC00566-201ENST00000561557 HUWE1Q7Z6Z7 4374 aaKnown RBP6.91□□□□□ -1.3
LINC00566-201ENST00000561557 TRAV12-2A0A075B6T6 113 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 IGHV3OR16-12A0A075B7B8 117 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 MAP1LC3B2A6NCE7 125 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 FBLL1A6NHQ2 334 aaKnown RBP6.91□□□□□ -1.3
LINC00566-201ENST00000561557 H7BYZ3 331 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 EIF3GO75821 320 aaKnown RBP eCLIP6.91□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF138P52744 262 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 TAS2R60P59551 318 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 ERCC8Q13216 396 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 SSX7Q7RTT5 188 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 C5orf17Q8NAS9 161 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 C11orf45Q8TAV5 145 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 LINC01587Q99440 93 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 VGLL1Q99990 258 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 MAP1LC3BQ9GZQ8 125 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 ARL2-SNX15V9GYD0 113 aa6.91□□□□□ -1.3
LINC00566-201ENST00000561557 IGKV2-40A0A087WW87 121 aaPredicted RBP6.9□□□□□ -1.3
LINC00566-201ENST00000561557 A0A1B0GVG6 124 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 CXorf65A6NEN9 183 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 KLLNB2CW77 178 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 K7EQM0 130 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 IGKV2D-40P01614 121 aaPredicted RBP6.9□□□□□ -1.3
LINC00566-201ENST00000561557 SPART-AS1P0CW21 52 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 SUMO1P63165 101 aaKnown RBP6.9□□□□□ -1.3
LINC00566-201ENST00000561557 ZNF493Q6ZR52 646 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 IQCF2Q8IXL9 164 aa6.9□□□□□ -1.3
LINC00566-201ENST00000561557 NIPSNAP3BQ9BS92 247 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms