RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 KLLNB2CW77 178 aa11.26□□□□□ -0.61
SNX1-213ENST00000561026 ZNF324O75467 553 aaPredicted RBP11.26□□□□□ -0.61
SNX1-213ENST00000561026 NHLH2Q02577 135 aa11.26□□□□□ -0.61
SNX1-213ENST00000561026 ASAH1Q13510 395 aa11.26□□□□□ -0.61
SNX1-213ENST00000561026 Q6ZTI0 123 aa11.26□□□□□ -0.61
SNX1-213ENST00000561026 AGPAT4-IT1Q9H0P7 198 aa11.26□□□□□ -0.61
SNX1-213ENST00000561026 CD300CQ08708 224 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 EXOC3-AS1Q8N2X6 119 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 C11orf72Q8NBR9 251 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 THAP6Q8TBB0 222 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 BLNKQ8WV28 456 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 SLC25A2Q9BXI2 301 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 TMPRSS5Q9H3S3 457 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 GSN-AS1Q9NRJ2 163 aa11.25□□□□□ -0.61
SNX1-213ENST00000561026 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 ESRGQ1W209 222 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 C9orf47Q6ZRZ4 202 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 ZNF680Q8NEM1 530 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 OR5C1Q8NGR4 320 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 S100ZQ8WXG8 99 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 C18orf15Q96N68 181 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 UPK3BQ9BT76 320 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
SNX1-213ENST00000561026 C16orf90A8MZG2 172 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 E5RGE8 158 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 SIX6O95475 246 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 NMBP08949 121 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 CRISP2P16562 243 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 RNASE4P34096 147 aaKnown RBP11.23□□□□□ -0.61
SNX1-213ENST00000561026 ICAM4Q14773 271 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 ANXA2RQ3ZCQ2 193 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 MIR17HGQ75NE6 70 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 SLC25A31Q9H0C2 315 aa11.23□□□□□ -0.61
SNX1-213ENST00000561026 TRGV2A0A075B6R0 118 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 GPX1P07203 203 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 NBEAP1P0C6P0 100 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 TTC32Q5I0X7 151 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 FAM122CQ6P4D5 195 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 EIF4E3Q8N5X7 224 aaKnown RBP11.22□□□□□ -0.61
SNX1-213ENST00000561026 VSIG2Q96IQ7 327 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 VGLL1Q99990 258 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 KRTAP1-5Q9BYS1 174 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 NMES1Q9C002 83 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 Q9H3A6 140 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 OR5AC2Q9NZP5 309 aa11.22□□□□□ -0.61
SNX1-213ENST00000561026 IGKV2-40A0A087WW87 121 aaPredicted RBP11.21□□□□□ -0.61
SNX1-213ENST00000561026 IGKV2D-40P01614 121 aaPredicted RBP11.21□□□□□ -0.61
SNX1-213ENST00000561026 ZFAND2AQ8N6M9 145 aa11.21□□□□□ -0.61
SNX1-213ENST00000561026 ENKURQ8TC29 256 aa11.21□□□□□ -0.61
SNX1-213ENST00000561026 OR51M1Q9H341 326 aa11.21□□□□□ -0.61
SNX1-213ENST00000561026 MRPS16Q9Y3D3 137 aaKnown RBP11.21□□□□□ -0.61
SNX1-213ENST00000561026 ABCA13Q86UQ4 5058 aa11.21□□□□□ -0.62
SNX1-213ENST00000561026 TRGV1A0A0A0MS02 117 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 H0YIZ8 118 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 TCL1AP56279 114 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 CYCSP99999 105 aaKnown RBP11.2□□□□□ -0.62
SNX1-213ENST00000561026 LRRC37A5PQ49AS3 106 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 TMEM78Q5T7P6 136 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 FXYD5Q96DB9 178 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 WDR61Q9GZS3 305 aaKnown RBP11.2□□□□□ -0.62
SNX1-213ENST00000561026 KCNIP2Q9NS61 270 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 FUT9Q9Y231 359 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 KLF12Q9Y4X4 402 aa11.2□□□□□ -0.62
SNX1-213ENST00000561026 A0A096LPF7 62 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 A0A1W2PPQ1 181 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 SPINK4O60575 86 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 UPK1BO75841 260 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 OR10J4P0C629 311 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 IBA57Q5T440 356 aaKnown RBP11.19□□□□□ -0.62
SNX1-213ENST00000561026 PRR9Q5T870 116 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 MRPL32Q9BYC8 188 aaKnown RBP11.19□□□□□ -0.62
SNX1-213ENST00000561026 TP53TG3Q9ULZ0 132 aa11.19□□□□□ -0.62
SNX1-213ENST00000561026 RGS13O14921 159 aa11.18□□□□□ -0.62
SNX1-213ENST00000561026 PRAF2O60831 178 aa11.18□□□□□ -0.62
SNX1-213ENST00000561026 Q6ZQT7 251 aa11.18□□□□□ -0.62
SNX1-213ENST00000561026 KRTAP4-5Q9BYR2 181 aa11.18□□□□□ -0.62
SNX1-213ENST00000561026 TRBV7-9A0A0J9YWB2 115 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 CDK2AP2O75956 126 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 ZNF138P52744 262 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 H2BFSP57053 126 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 IFITM3Q01628 133 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 PHYHIPLQ96FC7 376 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 HSPG2P98160 4391 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 LRP1BQ9NZR2 4599 aa11.17□□□□□ -0.62
SNX1-213ENST00000561026 IGHV1OR15-1A0A075B7D0 117 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 C17orf112F2Z3M2 114 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 INMT-MINDY4F8WBC2 141 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 BTF3P20290 206 aaKnown RBP11.16□□□□□ -0.62
SNX1-213ENST00000561026 PPP1R1CQ8WVI7 109 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 ST6GAL2Q96JF0 529 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 OR7C2O60412 319 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 RANP62826 216 aaKnown RBP11.16□□□□□ -0.62
SNX1-213ENST00000561026 SPATA12Q7Z6I5 190 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 Q8TAT8 98 aa11.16□□□□□ -0.62
SNX1-213ENST00000561026 ATP5SQ99766 215 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms