RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 YPEL4Q96NS1 127 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 RPS10P5Q9NQ39 176 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 ZFP30Q9Y2G7 519 aa8.45□□□□□ -1.06
SNX1-212ENST00000560861 DEFB1P60022 68 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 RPL11P62913 178 aaKnown RBP8.44□□□□□ -1.06
SNX1-212ENST00000560861 ERCC8Q13216 396 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 OR5I1Q13606 314 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 CD300EQ496F6 205 aaPredicted RBP8.44□□□□□ -1.06
SNX1-212ENST00000560861 LINC00322Q6ZN03 302 aaPredicted RBP8.44□□□□□ -1.06
SNX1-212ENST00000560861 FAM231DQ6ZW35 169 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 PRNTQ86SH4 94 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 CBLN2Q8IUK8 224 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 ZNF747Q9BV97 191 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 CTDSP1Q9GZU7 261 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 AGPAT4-IT1Q9H0P7 198 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 TUBA4BQ9H853 241 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 OSTCQ9NRP0 149 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 TMEM242Q9NWH2 141 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 ZNF492Q9P255 531 aa8.44□□□□□ -1.06
SNX1-212ENST00000560861 NOTCH3Q9UM47 2321 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 C19orf71A6NCJ1 209 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 IZUMO1RA6ND01 250 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 IGLV1-51P01701 117 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 MT-ND4LP03901 98 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 ID1P41134 155 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 BTN1A1Q13410 526 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 TMEM88Q6PEY1 159 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 ZNF738Q8NE65 137 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 OR8A1Q8NGG7 326 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 SPATA3Q8NHX4 192 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 DYNLRB2Q8TF09 96 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 ZC2HC1AQ96GY0 325 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 SFRP2Q96HF1 295 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 FAM19A4Q96LR4 140 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 PRR25Q96S07 402 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 ASCL2Q99929 193 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 GPR61Q9BZJ8 451 aa8.43□□□□□ -1.06
SNX1-212ENST00000560861 ZNF256Q9Y2P7 627 aaPredicted RBP8.43□□□□□ -1.06
SNX1-212ENST00000560861 AGRNO00468 2067 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 ZNF688P0C7X2 276 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 TFPI2P48307 235 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 CRIP1P50238 77 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 WFDC3Q8IUB2 231 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 OR10G8Q8NGN5 311 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 OR2K2Q8NGT1 345 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 Q8TAT8 98 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 ANAPC16Q96DE5 110 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 C8orf49Q96NF6 230 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 SPAG8Q99932 426 aaPredicted RBP8.42□□□□□ -1.06
SNX1-212ENST00000560861 SMCO4Q9NRQ5 59 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 V9GYV3 84 aa8.42□□□□□ -1.06
SNX1-212ENST00000560861 CXorf65A6NEN9 183 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 A8MTW9 85 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 F6UB75 175 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 H7BYZ3 331 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 PPP1R2P9O14990 202 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 PFN1P07737 140 aaKnown RBP8.41□□□□□ -1.06
SNX1-212ENST00000560861 ZNF705DP0CH99 300 aaPredicted RBP8.41□□□□□ -1.06
SNX1-212ENST00000560861 ZNF705BP0CI00 300 aaPredicted RBP8.41□□□□□ -1.06
SNX1-212ENST00000560861 MGST1P10620 155 aaKnown RBP8.41□□□□□ -1.06
SNX1-212ENST00000560861 ZNF138P52744 262 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 SAPCD1Q5SSQ6 148 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 APRG1Q8IVJ8 170 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 NUDT10Q8NFP7 164 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 NUDT11Q96G61 164 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 RNASE7Q9H1E1 156 aaKnown RBP8.41□□□□□ -1.06
SNX1-212ENST00000560861 LENEPQ9Y5L5 61 aa8.41□□□□□ -1.06
SNX1-212ENST00000560861 TRBV7-9A0A0J9YWB2 115 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 A0A0J9YX75 114 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 COLCA2A8K830 154 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 SAP30O75446 220 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 PF4P02776 101 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 CT45A10P0DMU9 189 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 ZNF80P51504 273 aaPredicted RBP8.4□□□□□ -1.06
SNX1-212ENST00000560861 SNRPD3P62318 126 aaKnown RBP8.4□□□□□ -1.06
SNX1-212ENST00000560861 PAFAH1B2P68402 229 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 PSMG4Q5JS54 123 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 RBPMS2Q6ZRY4 209 aaKnown RBP8.4□□□□□ -1.06
SNX1-212ENST00000560861 ZFAND2AQ8N6M9 145 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 LINC00477Q96M19 166 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 MAP6D1Q9H9H5 199 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 BIN3Q9NQY0 253 aa8.4□□□□□ -1.06
SNX1-212ENST00000560861 OR4C46A6NHA9 309 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 CRISP2P16562 243 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 ERVFC1-1P60608 527 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 HIST1H1AQ02539 215 aaPredicted RBP8.39□□□□□ -1.07
SNX1-212ENST00000560861 ODF3L2Q3SX64 289 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 IBA57Q5T440 356 aaKnown RBP8.39□□□□□ -1.07
SNX1-212ENST00000560861 TMEM78Q5T7P6 136 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 FOXI2Q6ZQN5 318 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 WFDC9Q8NEX5 89 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 OR10J6PQ8NGY7 276 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 IMMP2LQ96T52 175 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 PYGO2Q9BRQ0 406 aa8.39□□□□□ -1.07
SNX1-212ENST00000560861 SAV1Q9H4B6 383 aaPredicted RBP8.39□□□□□ -1.07
SNX1-212ENST00000560861 ELOBQ15370 118 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 BEAN1Q3B7T3 259 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 CT83Q5H943 113 aa8.38□□□□□ -1.07
SNX1-212ENST00000560861 PRR9Q5T870 116 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms