RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 MUC21Q5SSG8 566 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 SAPCD1Q5SSQ6 148 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LGALS9CQ6DKI2 356 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CCDC144NLQ6NUI1 221 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 LYPD2Q6UXB3 125 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 GOLT1AQ6ZVE7 132 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PPP1R27Q86WC6 154 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CIARTQ8N365 385 aaPredicted RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 DEFB108BQ8NET1 73 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 OR1B1Q8NGR6 318 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 OR10AG1Q8NH19 301 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PIFOQ8TCI5 191 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 BLNKQ8WV28 456 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 SRSF12Q8WXF0 261 aaKnown RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 ZC2HC1AQ96GY0 325 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 PGLYRP4Q96LB8 373 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RNF5Q99942 180 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RASL11BQ9BPW5 248 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 MAP1LC3CQ9BXW4 147 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 CNFNQ9BYD5 112 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 SLC25A39Q9BZJ4 359 aaPredicted RBP1.9□□□□□ -2.11
SPG11-223ENST00000560858 RAB1BQ9H0U4 201 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 NGBQ9NPG2 151 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 TP73-AS1Q9UF72 201 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RPH3ALQ9UNE2 315 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 RNF24Q9Y225 148 aa1.9□□□□□ -2.11
SPG11-223ENST00000560858 FRYLO94915 3013 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 IGLV11-55A0A075B6I3 123 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 A0A087X0K7 114 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 IGHV3-72A0A0B4J1Y9 119 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 SPAARA0A1B0GVQ0 90 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 OR2T8A6NH00 312 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 CBY3A6NI87 242 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 NPIPB5A8MRT5 1133 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ODF3BA8MYP8 253 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HSBP1L1C9JCN9 74 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 E7EQL1 145 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 C16orf97H3BN30 126 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 BUB1B-PAK6H3BSN5 160 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 H3BTX0 84 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 K7EQM0 130 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 CD5LO43866 347 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 NCR2O95944 276 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 IGHV3-48P01763 117 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 IGLC6P0CF74 106 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 CT45A10P0DMU9 189 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HLA-DRB4P13762 266 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ORM2P19652 201 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 CD24P25063 80 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HTR1DP28221 377 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 FCGR2BP31994 310 aaPredicted RBP1.89□□□□□ -2.11
SPG11-223ENST00000560858 PCP4P48539 62 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ARF6P62330 175 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PSG9Q00887 426 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HSD52Q0P140 79 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 KLK9Q2XQG4 91 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HCP5Q6MZN7 132 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 UFSP1Q6NVU6 142 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 Q6ZVH6 145 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PRNTQ86SH4 94 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 GTSCR1Q86UQ5 136 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 BPIFA4PQ86YQ2 179 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 BOD1L2Q8IYS8 172 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 EXOC3-AS1Q8N2X6 119 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 DEFB123Q8N688 67 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 Q8N6K4 173 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ZNF491Q8N8L2 437 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 MAPK1IP1LQ8NDC0 245 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 LY6G5BQ8NDX9 201 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 DEFB124Q8NES8 71 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PRSS33Q8NF86 280 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 NPBQ8NG41 125 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 OR4C5Q8NGB2 326 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 OR9G4Q8NGQ1 327 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 OR1N2Q8NGR9 330 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 RNASE6Q93091 150 aaKnown RBP1.89□□□□□ -2.11
SPG11-223ENST00000560858 RNF125Q96EQ8 232 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ZNF414Q96IQ9 312 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 SGK494Q96LW2 274 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 FBXL15Q9H469 300 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 UBTD1Q9HAC8 227 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PEF1Q9UBV8 284 aaKnown RBP1.89□□□□□ -2.11
SPG11-223ENST00000560858 KLK9Q9UKQ9 250 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PSG8Q9UQ74 426 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 HLA-DRB4X5D2U9 266 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 POLEQ07864 2286 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 PKDREJQ9NTG1 2253 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 WDFY3Q8IZQ1 3526 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 FREM2Q5SZK8 3169 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 CFAP54Q96N23 3096 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 ARHGAP32A7KAX9 2087 aa1.89□□□□□ -2.11
SPG11-223ENST00000560858 APC2O95996 2303 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 IGHV3-21A0A0B4J1V1 117 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 TRAV8-6A0A0B4J262 113 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 IGHV4-28A0A0C4DH34 117 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 TMEM213A2RRL7 107 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 RBAKDNA6NC62 111 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 VSTM5A8MXK1 200 aa1.88□□□□□ -2.11
SPG11-223ENST00000560858 OOSP1A8MZH6 123 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms