RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 FLG2Q5D862 2391 aaPredicted RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 A0A087WWC5 75 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 A0A1W2PPV4 95 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 COLCA2A8K830 154 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 TMEM250H0YL14 139 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 INAFM2P0DMQ5 153 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 CRYBB3P26998 211 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 GPX4P36969 197 aaPredicted RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 FAM3BP58499 235 aaPredicted RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 B2MP61769 119 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 FLI1Q01543 452 aaPredicted RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 GCSAMLQ5JQS6 135 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 TMEM144Q7Z5S9 345 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 IQCF2Q8IXL9 164 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 RNASEH2CQ8TDP1 164 aaKnown RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 SLC35E1Q96K37 410 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 C1QTNF4Q9BXJ3 329 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 TMPRSS5Q9H3S3 457 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 MRPL36Q9P0J6 103 aaKnown RBP6.98□□□□□ -1.29
TPM1-225ENST00000560679 SLC45A2Q9UMX9 530 aa6.98□□□□□ -1.29
TPM1-225ENST00000560679 TMEM189A5PLL7 270 aa6.97□□□□□ -1.29
TPM1-225ENST00000560679 HELTA6NFD8 242 aa6.97□□□□□ -1.29
TPM1-225ENST00000560679 B4DEV8 164 aa6.97□□□□□ -1.29
TPM1-225ENST00000560679 H3BMM0 161 aa6.97□□□□□ -1.29
TPM1-225ENST00000560679 HMGB3O15347 200 aaKnown RBP6.97□□□□□ -1.29
TPM1-225ENST00000560679 SUB1P53999 127 aaKnown RBP eCLIP6.97□□□□□ -1.29
TPM1-225ENST00000560679 RHOBP62745 196 aa6.97□□□□□ -1.29
TPM1-225ENST00000560679 PNRC1Q12796 327 aaPredicted RBP6.97□□□□□ -1.29
TPM1-225ENST00000560679 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
TPM1-225ENST00000560679 PAGE4O60829 102 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 CXorf1O96002 111 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 MT-ND4LP03901 98 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 LINC00869P0C866 280 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 STAG3L2P0CL84 134 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 STAG3L3P0CL85 134 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 NPPCP23582 126 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 OR10J1P30954 320 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 GAMTQ14353 236 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 CYP2G1PQ6ZSU1 146 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 GLMPQ8WWB7 406 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 METTL26Q96S19 204 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 SMIM7Q9BQ49 75 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 TXNDC17Q9BRA2 123 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 KRTAP1-5Q9BYS1 174 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 SDF2L1Q9HCN8 221 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 HMCN2Q8NDA2 5059 aa6.96□□□□□ -1.3
TPM1-225ENST00000560679 IGHV3OR16-12A0A075B7B8 117 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 TEX48A0A1B0GUV7 120 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 A0A1W2PS18 150 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 ZNF727A8MUV8 499 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 F6UZH7 168 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 ARL14EPLP0DKL9 152 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 HLA-DRB4P13762 266 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 DEFB1P60022 68 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 NUTF2P61970 127 aaKnown RBP6.95□□□□□ -1.3
TPM1-225ENST00000560679 GDF5OSQ5U4N7 250 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 SPATA31B1PQ5VZV4 182 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 C15orf53Q8NAA6 179 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 YPEL4Q96NS1 127 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 U3KQE9 123 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 HLA-DRB4X5D2U9 266 aa6.95□□□□□ -1.3
TPM1-225ENST00000560679 IGKV1OR2-108A0A075B7D4 117 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 SMIM9A6NGZ8 99 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 PDE6DO43924 150 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 IGKV1-17P01599 117 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 RAB5AP20339 215 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 GCHFRP30047 84 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 FXYD7P58549 80 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 RAB5BP61020 215 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 TMEM241Q24JQ0 296 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 ETFRF1Q6IPR1 90 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 THAP8Q8NA92 274 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 ISOC2Q96AB3 205 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 RPUSD4Q96CM3 377 aaKnown RBP6.94□□□□□ -1.3
TPM1-225ENST00000560679 ACY3Q96HD9 319 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 ATG101Q9BSB4 218 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 FNDC4Q9H6D8 234 aaPredicted RBP6.94□□□□□ -1.3
TPM1-225ENST00000560679 FUT9Q9Y231 359 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 PRELID1Q9Y255 219 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 YTHDF2Q9Y5A9 579 aaKnown RBP6.94□□□□□ -1.3
TPM1-225ENST00000560679 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
TPM1-225ENST00000560679 C1orf196B1AJZ1 125 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 CLN5O75503 358 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 IGKV3-20P01619 116 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 OR5G3P0C626 314 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 ATP5G3P48201 142 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 UBE2G2P60604 165 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 ADIRFQ15847 76 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 ZNF674Q2M3X9 581 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 Q5VSD8 79 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 C16orf54Q6UWD8 224 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 MIR17HGQ75NE6 70 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 MRPL32Q9BYC8 188 aaKnown RBP6.93□□□□□ -1.3
TPM1-225ENST00000560679 CTDSP1Q9GZU7 261 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 PARLQ9H300 379 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 LINC00588Q9Y4M8 146 aa6.93□□□□□ -1.3
TPM1-225ENST00000560679 CORTO00230 105 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms