RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 PFDN5Q99471 154 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 SLC50A1Q9BRV3 221 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 SHANK2-AS3Q9BTD1 123 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 NPCDR1Q9BY65 106 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 SMIM3Q9BZL3 60 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 WDR61Q9GZS3 305 aaKnown RBP6.69□□□□□ -1.34
HERC1-209ENST00000560519 ARL6Q9H0F7 186 aa6.69□□□□□ -1.34
HERC1-209ENST00000560519 NOP10Q9NPE3 64 aaKnown RBP6.69□□□□□ -1.34
HERC1-209ENST00000560519 APOBP04114 4563 aaKnown RBP6.69□□□□□ -1.34
HERC1-209ENST00000560519 ERVFC1-1P60608 527 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 Q5BKY6 102 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 MIC13Q5XKP0 118 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 LCN15Q6UWW0 184 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 TMEM182Q6ZP80 229 aaPredicted RBP6.68□□□□□ -1.34
HERC1-209ENST00000560519 PARD6GQ9BYG4 376 aaPredicted RBP6.68□□□□□ -1.34
HERC1-209ENST00000560519 ARV1Q9H2C2 271 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 SLC39A9Q9NUM3 307 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 TNFSF18Q9UNG2 199 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 PXMP4Q9Y6I8 212 aa6.68□□□□□ -1.34
HERC1-209ENST00000560519 BORCS7-ASMTA0A0B4J1R7 106 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 TAAR5O14804 337 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 ARPC5O15511 151 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 PRM2P04554 102 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 KRTAP10-2P60368 255 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 PSG3Q16557 428 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 C10orf113Q5VZT2 155 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 IGFL4Q6B9Z1 124 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 LINC00612Q8N6U2 182 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 FRZBQ92765 325 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 C17orf77Q96MU5 243 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 KRTAP1-5Q9BYS1 174 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 DNAJC4Q9NNZ3 241 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 PGPEP1Q9NXJ5 209 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 ZNF586Q9NXT0 402 aa6.67□□□□□ -1.34
HERC1-209ENST00000560519 A0A0J9YY99 117 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 RNF222A6NCQ9 220 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 HMSDA8MTL9 139 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 G3V3Q6 166 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 LINC00315P59091 139 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 ZNF345Q14585 488 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 LINC00305Q7Z4B0 112 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 AKAP14Q86UN6 197 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 TCTE3Q8IZS6 198 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 RPUSD4Q96CM3 377 aaKnown RBP6.66□□□□□ -1.34
HERC1-209ENST00000560519 UHRF2Q96PU4 802 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 TIMM9Q9Y5J7 89 aa6.66□□□□□ -1.34
HERC1-209ENST00000560519 hCG_2014768A0A024R1R8 64 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 A0A0D9SG52 128 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 GAGE12BA1L429 117 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 SMLR1H3BR10 107 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 GAGE7O76087 117 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 GAGE12FP0CL80 117 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 GAGE12GP0CL81 117 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 GAGE12IP0CL82 117 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 INAFM2P0DMQ5 153 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 PATE2Q6UY27 113 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 NFE4Q86UQ8 179 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 BPIFA4PQ86YQ2 179 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 ZNF680Q8NEM1 530 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 TMEM37Q8WXS4 190 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 ST6GAL2Q96JF0 529 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 ODF3Q96PU9 254 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 PYGO2Q9BRQ0 406 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 WFDC1Q9HC57 220 aa6.65□□□□□ -1.34
HERC1-209ENST00000560519 SIVA1O15304 175 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 HOXA5P20719 270 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 LEPP41159 167 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 ESRGQ1W209 222 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 ACOT6Q3I5F7 207 aaPredicted RBP6.64□□□□□ -1.35
HERC1-209ENST00000560519 FFAR4Q5NUL3 377 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 Q5VSD8 79 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 GFI1BQ5VTD9 330 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 LYPD1Q8N2G4 141 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 C18orf15Q96N68 181 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 PSMG3Q9BT73 122 aaPredicted RBP6.64□□□□□ -1.35
HERC1-209ENST00000560519 MRPL32Q9BYC8 188 aaKnown RBP6.64□□□□□ -1.35
HERC1-209ENST00000560519 TMPRSS5Q9H3S3 457 aa6.64□□□□□ -1.35
HERC1-209ENST00000560519 ZNF331Q9NQX6 463 aaPredicted RBP6.64□□□□□ -1.35
HERC1-209ENST00000560519 TRGV2A0A075B6R0 118 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 KANTRA0A1W2PQU2 76 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 MBP02144 154 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 EIF5AP63241 154 aaKnown RBP6.63□□□□□ -1.35
HERC1-209ENST00000560519 SERF2P84101 59 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 DAZ2Q13117 558 aaKnown RBP6.63□□□□□ -1.35
HERC1-209ENST00000560519 Q6ZRN7 208 aaPredicted RBP6.63□□□□□ -1.35
HERC1-209ENST00000560519 KCNRGQ8N5I3 272 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 HSD17B11Q8NBQ5 300 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 HYLS1Q96M11 299 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 ARPC5LQ9BPX5 153 aa6.63□□□□□ -1.35
HERC1-209ENST00000560519 TRAV9-2A0A087WT02 112 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 A0A096LPF7 62 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 A0A1W2PPV4 95 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 K7EP13 123 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 PFDN1O60925 122 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 C1QBP02746 253 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 ATP6V0CP27449 155 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 TAS2R45P59539 299 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 GUK1Q16774 197 aa6.62□□□□□ -1.35
HERC1-209ENST00000560519 RPL7L1Q6DKI1 246 aaKnown RBP6.62□□□□□ -1.35
HERC1-209ENST00000560519 OR11H4Q8NGC9 324 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms