RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 DIRC3C9JPN6 131 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 J3KRW8 73 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 CDKN1BP46527 198 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 UBE2G2P60604 165 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 FAM74A1Q5RGS3 127 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 C9orf47Q6ZRZ4 202 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 CMTM2Q8TAZ6 248 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 RXFP4Q8TDU9 374 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 ODF3Q96PU9 254 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 GOLT1BQ9Y3E0 138 aa11.22□□□□□ -0.61
LYSMD2-204ENST00000560491 A0A1B0GV50 99 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 GGTLC3B5MD39 225 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 SLC25A5P05141 298 aaKnown RBP11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 Q8TAT8 98 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 SFT2D1Q8WV19 159 aa11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 YTHDF2Q9Y5A9 579 aaKnown RBP11.21□□□□□ -0.61
LYSMD2-204ENST00000560491 MIFP14174 115 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 TSPOP30536 169 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 LEPP41159 167 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 GFI1BQ5VTD9 330 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 EIF5AL1Q6IS14 154 aaKnown RBP11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 GOLT1AQ6ZVE7 132 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 MBD3L1Q8WWY6 194 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 FAM19A4Q96LR4 140 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 LINC00477Q96M19 166 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 TMEM208Q9BTX3 173 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 ZNF492Q9P255 531 aa11.2□□□□□ -0.62
LYSMD2-204ENST00000560491 A0A1W2PRE2 83 aa11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 RBAKDNA6NC62 111 aa11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 PRM2P04554 102 aa11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 ZNF138P52744 262 aa11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 SUMO1P63165 101 aaKnown RBP11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 C5orf17Q8NAS9 161 aa11.19□□□□□ -0.62
LYSMD2-204ENST00000560491 TRAV8-1A0A0A6YYK1 113 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 FAM74A7A6NL05 159 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 H2AFB1P0C5Y9 115 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 SULT1A2P50226 295 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 PRR9Q5T870 116 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 MUC7Q8TAX7 377 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 NEU1Q99519 415 aa11.18□□□□□ -0.62
LYSMD2-204ENST00000560491 TRAV12-3A0A0B4J271 114 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 ZNF705GA8MUZ8 300 aaPredicted RBP11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 KLLNB2CW77 178 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 HBE1P02100 147 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 TCRAP04437 139 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 RAB5CP51148 216 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 BTN1A1Q13410 526 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 ZFAND2AQ8N6M9 145 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 ARL6IP6Q8N6S5 226 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 SGK494Q96LW2 274 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 LINC01587Q99440 93 aa11.17□□□□□ -0.62
LYSMD2-204ENST00000560491 STARD9Q9P2P6 4700 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 LOC102723971A0A1B0GUV8 181 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 C7orf71A4D174 169 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 SMIM9A6NGZ8 99 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 CRISP2P16562 243 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 ZFAND6Q6FIF0 208 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 ALKAL2Q6UX46 152 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 EPDR1Q9UM22 224 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 CSMD3Q7Z407 3707 aa11.16□□□□□ -0.62
LYSMD2-204ENST00000560491 GPX1P07203 203 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 HTN1P15515 57 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 ATP5G3P48201 142 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 EMP1P54849 157 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 RRN3P1Q2M238 152 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 TMEM256Q8N2U0 113 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 C20orf144Q9BQM9 153 aa11.15□□□□□ -0.62
LYSMD2-204ENST00000560491 H7BYZ3 331 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 PAGE4O60829 102 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 IFNA7P01567 189 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 AZU1P20160 251 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 NANOS2P60321 138 aaKnown RBP11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 CCL20P78556 96 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 PMS2P11Q13670 270 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 CST9LP1Q5W188 147 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 Q6ZQT7 251 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 CYB561D1Q8N8Q1 229 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 NIPSNAP3BQ9BS92 247 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 ATG101Q9BSB4 218 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
LYSMD2-204ENST00000560491 TRBV7-9A0A0J9YWB2 115 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 SERTM2A0A1B0GWG4 89 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 PEX7O00628 323 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 IGLV2-11P01706 119 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 NMBP08949 121 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 TAS2R60P59551 318 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 CCDC28AQ8IWP9 274 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 C11orf45Q8TAV5 145 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 TVP23CQ96ET8 276 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 LINC00479Q96M42 142 aa11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 NKX6-2Q9C056 277 aaPredicted RBP11.13□□□□□ -0.63
LYSMD2-204ENST00000560491 TRAV1-1A0A0B4J248 108 aa11.12□□□□□ -0.63
LYSMD2-204ENST00000560491 TRAV34A0A0B4J273 112 aa11.12□□□□□ -0.63
LYSMD2-204ENST00000560491 F6UZH7 168 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms