RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 VWC2LB2RUY7 222 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 EREGO14944 169 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 ARMS2P0C7Q2 107 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 DUX4L9Q6RFH8 374 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-208ENST00000560371 LTBP2Q14767 1821 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 YPEL3P61236 119 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-208ENST00000560371 SSBP2P81877 361 aaPredicted RBP10.81□□□□□ -0.68
TRAF3-208ENST00000560371 DMRTA1Q5VZB9 504 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 FAM90A2PQ658T7 463 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 ANAPC13Q9BS18 74 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 NCOR1P1Q9H4R4 102 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 SMPXQ9UHP9 88 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 CLPSL1A2RUU4 121 aa10.81□□□□□ -0.68
TRAF3-208ENST00000560371 SPTBN4Q9H254 2564 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 NDUFS5O43920 106 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 FHL1Q13642 323 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 DMRTC2Q8IXT2 367 aaPredicted RBP10.8□□□□□ -0.68
TRAF3-208ENST00000560371 RASL10AQ92737 203 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 TMEM126AQ9H061 195 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 TRAV9-2A0A087WT02 112 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BKO60814 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BJP06899 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BOP23527 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BBP33778 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BDP58876 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BCP62807 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST2H2BEQ16778 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BHQ93079 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BNQ99877 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 HIST1H2BMQ99879 126 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 MEGF9Q9H1U4 602 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 RHODO00212 210 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 DEFB113Q30KQ7 82 aa10.8□□□□□ -0.68
TRAF3-208ENST00000560371 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 NDUFS7O75251 213 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 WDR86Q86TI4 376 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 C5orf30Q96GV9 206 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 LINC00518Q8N0U6 118 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 ZNF503-AS2A6NEH8 195 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 NDUFA4O00483 81 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
TRAF3-208ENST00000560371 C1orf194Q5T5A4 169 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 LINC00311Q8N616 119 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 PRRC2AP48634 2157 aaKnown RBP10.79□□□□□ -0.68
TRAF3-208ENST00000560371 IGHV2-5P01817 119 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 WT1P19544 449 aaPredicted RBP10.79□□□□□ -0.68
TRAF3-208ENST00000560371 ZNF114Q8NC26 417 aa10.79□□□□□ -0.68
TRAF3-208ENST00000560371 WISP1O95388 367 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 PCP4P48539 62 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 GAGE2EQ4V326 116 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 LINC00479Q96M42 142 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 KAAG1Q9UBP8 84 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 GAGE2DQ9UEU5 116 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 TSSC4Q9Y5U2 329 aaPredicted RBP10.78□□□□□ -0.68
TRAF3-208ENST00000560371 ESDP10768 282 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 MUC4Q99102 2169 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
TRAF3-208ENST00000560371 RBMY1FQ15415 496 aaKnown RBP10.78□□□□□ -0.68
TRAF3-208ENST00000560371 ARTNQ5T4W7 220 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 VPREB3Q9UKI3 123 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 TRBV24-1A0A075B6N3 115 aa10.78□□□□□ -0.68
TRAF3-208ENST00000560371 CENPFP49454 3210 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 SETD2Q9BYW2 2564 aaPredicted RBP10.77□□□□□ -0.68
TRAF3-208ENST00000560371 KNCNA6PVL3 124 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 AZU1P20160 251 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 IGF2-ASQ6U949 168 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 C8orf86Q6ZUL3 223 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 AMN1Q8IY45 258 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 ERG28Q9UKR5 140 aa10.77□□□□□ -0.68
TRAF3-208ENST00000560371 K7EM74 188 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 CDKN1BP46527 198 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 MRAPQ8TCY5 172 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 H3BUT2 72 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 TRPT1Q86TN4 253 aaKnown RBP10.77□□□□□ -0.69
TRAF3-208ENST00000560371 DLX4Q92988 240 aaPredicted RBP10.77□□□□□ -0.69
TRAF3-208ENST00000560371 CYTL1Q9NRR1 136 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 ZNF561-AS1K7EIQ3 104 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 ELANEP08246 267 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 ABCA12Q86UK0 2595 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 SHISA9B4DS77 424 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 ATXN8Q156A1 80 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 MRPL27Q9P0M9 148 aaKnown RBP10.77□□□□□ -0.69
TRAF3-208ENST00000560371 LY96Q9Y6Y9 160 aa10.77□□□□□ -0.69
TRAF3-208ENST00000560371 IGHV3-16A0A0C4DH30 117 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 LAMTOR2Q9Y2Q5 125 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 PRIMA1Q86XR5 153 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 TMEM158Q8WZ71 300 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 A8MWV9 139 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 A0A1B0GW64 132 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 CCL24O00175 119 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 TMEM75Q8N9X5 138 aa10.76□□□□□ -0.69
TRAF3-208ENST00000560371 MMP23AO75900 390 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 KLK9Q9UKQ9 250 aa10.75□□□□□ -0.69
TRAF3-208ENST00000560371 KLF2Q9Y5W3 355 aaPredicted RBP10.75□□□□□ -0.69
TRAF3-208ENST00000560371 GAGE12BA1L429 117 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms