RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 SPINK8P0C7L1 97 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ARMS2P0C7Q2 107 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 IFI27P40305 119 aaPredicted RBP4.05□□□□□ -1.76
TPM1-222ENST00000560131 ASIPP42127 132 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ZNF137PP52743 207 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ZNF138P52744 262 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 GNG5P63218 68 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ETDBQ3ZM63 59 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 CFAP126Q5VTH2 177 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ZNF833PQ6ZTB9 187 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 S100A7AQ86SG5 101 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 RFESDQ8TAC1 157 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 KLF14Q8TD94 323 aaPredicted RBP4.05□□□□□ -1.76
TPM1-222ENST00000560131 C18orf15Q96N68 181 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 PSG8Q9UQ74 426 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 ASXL3Q9C0F0 2248 aa4.05□□□□□ -1.76
TPM1-222ENST00000560131 TRBV20-1A0A075B6N2 111 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 IGKV1D-17A0A075B6S4 117 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 SPAARA0A1B0GVQ0 90 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 K7EM74 188 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 LINC01565O15544 149 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 CDK2AP2O75956 126 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 DPM2O94777 84 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 LHBP01229 141 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 IGKV3-15P01624 115 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 NMUP48645 174 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 PDE6HQ13956 83 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 OR4C13Q8NGP0 309 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 DLX4Q92988 240 aaPredicted RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 MRPL53Q96EL3 112 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 CITED1Q99966 193 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 NAA38Q9BRA0 125 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 MCRIP2Q9BUT9 160 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 SPANXDQ9BXN6 97 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 MAP1LC3AQ9H492 121 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 NHP2Q9NX24 153 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 U3KQA8 63 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 ASCC3Q8N3C0 2202 aaKnown RBP4.04□□□□□ -1.76
TPM1-222ENST00000560131 FREM1Q5H8C1 2179 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 DNAH12Q6ZR08 3092 aa4.04□□□□□ -1.76
TPM1-222ENST00000560131 CABIN1Q9Y6J0 2220 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 TRAV12-1A0A0B4J245 112 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 PINLYPA6NC86 204 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 D6R8Y8 96 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 K7EMI3 77 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 CEACAM4O75871 244 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 CD24P25063 80 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 COL8A2P25067 703 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 PLNP26678 52 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 UBE2D3P61077 147 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 UBE2D2P62837 147 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 LOXL1Q08397 574 aaPredicted RBP4.03□□□□□ -1.76
TPM1-222ENST00000560131 PLGLAQ15195 96 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 MRPL23Q16540 153 aaKnown RBP4.03□□□□□ -1.76
TPM1-222ENST00000560131 ALKBH6Q3KRA9 238 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 ZFAND6Q6FIF0 208 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 ZNF826PQ6ZT77 177 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 SH2D6Q7Z4S9 175 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 LINC00311Q8N616 119 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 NTN5Q8WTR8 489 aaPredicted RBP4.03□□□□□ -1.76
TPM1-222ENST00000560131 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.76
TPM1-222ENST00000560131 RLN3Q8WXF3 142 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 C20orf78Q9BR46 151 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 DCTN5Q9BTE1 182 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 HINT2Q9BX68 163 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 YAE1D1Q9NRH1 226 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 RPUSD1Q9UJJ7 312 aaKnown RBP4.03□□□□□ -1.76
TPM1-222ENST00000560131 CACNA1DQ01668 2161 aa4.03□□□□□ -1.76
TPM1-222ENST00000560131 TRBV19A0A075B6N1 114 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 IGKV2D-26A0A0A0MRZ7 120 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 CENPVL3A0A0U1RRI6 287 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 NTN3O00634 580 aaPredicted RBP4.02□□□□□ -1.77
TPM1-222ENST00000560131 IGLV1-44P01699 117 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 IGLC6P0CF74 106 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 IGHV4-38-2P0DP08 117 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 UBE2D1P51668 147 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 XGP55808 180 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 WT1-ASQ06250 92 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 C3AR1Q16581 482 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 FAM106AQ4KMX7 169 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 PRR30Q53SZ7 412 aaPredicted RBP4.02□□□□□ -1.77
TPM1-222ENST00000560131 MORN3Q6PF18 240 aaPredicted RBP4.02□□□□□ -1.77
TPM1-222ENST00000560131 Q6ZS52 159 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 Q8N8P6 123 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 OR11H6Q8NGC7 330 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 RPEQ96AT9 228 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 ANAPC13Q9BS18 74 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 SPANXCQ9NY87 97 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 HIGD1AQ9Y241 93 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 KNL1Q8NG31 2342 aa4.02□□□□□ -1.77
TPM1-222ENST00000560131 BRWD1Q9NSI6 2320 aa4.01□□□□□ -1.77
TPM1-222ENST00000560131 IGLV2-18A0A075B6J9 118 aa4.01□□□□□ -1.77
TPM1-222ENST00000560131 A0A087WX48 190 aa4.01□□□□□ -1.77
TPM1-222ENST00000560131 MYMXA0A1B0GTQ4 84 aa4.01□□□□□ -1.77
TPM1-222ENST00000560131 LINC01549A6NIU2 74 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms