RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 DNAH6Q9C0G6 4158 aa8.93□□□□□ -0.98
LRRC28-214ENST00000559433 TRAV12-3A0A0B4J271 114 aa8.92□□□□□ -0.98
LRRC28-214ENST00000559433 TAS2R45P59539 299 aa8.92□□□□□ -0.98
LRRC28-214ENST00000559433 UBE2L3P68036 154 aaKnown RBP8.92□□□□□ -0.98
LRRC28-214ENST00000559433 KHDC3LQ587J8 217 aa8.92□□□□□ -0.98
LRRC28-214ENST00000559433 ZNF493Q6ZR52 646 aa8.92□□□□□ -0.98
LRRC28-214ENST00000559433 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
LRRC28-214ENST00000559433 TMEM263Q8WUH6 116 aaKnown RBP8.92□□□□□ -0.98
LRRC28-214ENST00000559433 PHYHIPLQ96FC7 376 aa8.92□□□□□ -0.98
LRRC28-214ENST00000559433 TIMM8BQ9Y5J9 83 aaPredicted RBP8.92□□□□□ -0.98
LRRC28-214ENST00000559433 IGKV2-40A0A087WW87 121 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-214ENST00000559433 IGKV2D-40P01614 121 aaPredicted RBP8.91□□□□□ -0.98
LRRC28-214ENST00000559433 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
LRRC28-214ENST00000559433 ZNF503Q96F45 646 aa8.91□□□□□ -0.98
LRRC28-214ENST00000559433 LINC00477Q96M19 166 aa8.91□□□□□ -0.98
LRRC28-214ENST00000559433 AGPAT4-IT1Q9H0P7 198 aa8.91□□□□□ -0.98
LRRC28-214ENST00000559433 NOP10Q9NPE3 64 aaKnown RBP8.91□□□□□ -0.98
LRRC28-214ENST00000559433 FRAS1Q86XX4 4008 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 C7orf71A4D174 169 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 F5H768 121 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 SLC25A5P05141 298 aaKnown RBP8.9□□□□□ -0.98
LRRC28-214ENST00000559433 RANP62826 216 aaKnown RBP8.9□□□□□ -0.98
LRRC28-214ENST00000559433 ACOT6Q3I5F7 207 aaPredicted RBP8.9□□□□□ -0.98
LRRC28-214ENST00000559433 TMEM78Q5T7P6 136 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 C9orf47Q6ZRZ4 202 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 VGLL1Q99990 258 aa8.9□□□□□ -0.98
LRRC28-214ENST00000559433 CBY3A6NI87 242 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 SNURFLB1AK76 121 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 KLLNB2CW77 178 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 EIF3GO75821 320 aaKnown RBP eCLIP8.89□□□□□ -0.99
LRRC28-214ENST00000559433 ATP5G1P05496 136 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 GIPP09681 153 aaPredicted RBP8.89□□□□□ -0.99
LRRC28-214ENST00000559433 M6PRP20645 277 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 RNASE4P34096 147 aaKnown RBP8.89□□□□□ -0.99
LRRC28-214ENST00000559433 CSN1S1P47710 185 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 ATP5G3P48201 142 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 RAB2AP61019 212 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 BTN1A1Q13410 526 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 ZNF266Q14584 549 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 RGS21Q2M5E4 152 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 C15orf53Q8NAA6 179 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 ASB13Q8WXK3 278 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 FAM19A4Q96LR4 140 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 AQP10Q96PS8 301 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 PYGO2Q9BRQ0 406 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 ATG101Q9BSB4 218 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 Q9H3A6 140 aa8.89□□□□□ -0.99
LRRC28-214ENST00000559433 A0A1W2PPV4 95 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 M0R2N4 97 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 GPX1P07203 203 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 CRISP2P16562 243 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 CD300CQ08708 224 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 Q5BKY6 102 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 LYPD1Q8N2G4 141 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 HSD17B11Q8NBQ5 300 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 DNAH10Q8IVF4 4471 aa8.88□□□□□ -0.99
LRRC28-214ENST00000559433 NUDT3O95989 172 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 GHRHP01286 108 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 ZNF138P52744 262 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 RNF212Q495C1 297 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 PQLC2Q6ZP29 291 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 INO80EQ8NBZ0 244 aaPredicted RBP8.87□□□□□ -0.99
LRRC28-214ENST00000559433 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 OR10G9Q8NGN4 311 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 OR10G7Q8NGN6 311 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 Q8TAT8 98 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 ZNF492Q9P255 531 aa8.87□□□□□ -0.99
LRRC28-214ENST00000559433 NACAE9PAV3 2078 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 FXYD6-FXYD2A0A087WZ82 144 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 RBAKDNA6NC62 111 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 HMGB3O15347 200 aaKnown RBP8.86□□□□□ -0.99
LRRC28-214ENST00000559433 ZNF324O75467 553 aaPredicted RBP8.86□□□□□ -0.99
LRRC28-214ENST00000559433 NMBP08949 121 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 PRR9Q5T870 116 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 ZFAND2AQ8N6M9 145 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 ZNF680Q8NEM1 530 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 OR2G3Q8NGZ4 309 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 RXFP4Q8TDU9 374 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 HYLS1Q96M11 299 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 OTORQ9NRC9 128 aa8.86□□□□□ -0.99
LRRC28-214ENST00000559433 GAGE12BA1L429 117 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 RGS13O14921 159 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 GAGE7O76087 117 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 GAGE12FP0CL80 117 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 GAGE12GP0CL81 117 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 GAGE12IP0CL82 117 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 ATP6V0CP27449 155 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 CDC34P49427 236 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-214ENST00000559433 OR5I1Q13606 314 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 FAM74A1Q5RGS3 127 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 LINC00336Q6ZUF6 198 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 EIF4E3Q8N5X7 224 aaKnown RBP8.85□□□□□ -0.99
LRRC28-214ENST00000559433 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 OR2T35Q8NGX2 323 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 CMTM2Q8TAZ6 248 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 LINC00467Q9BRT7 94 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 PSMG3Q9BT73 122 aaPredicted RBP8.85□□□□□ -0.99
LRRC28-214ENST00000559433 GSN-AS1Q9NRJ2 163 aa8.85□□□□□ -0.99
LRRC28-214ENST00000559433 RPH3ALQ9UNE2 315 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms