RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 UBE2L3P68036 154 aaKnown RBP7.75□□□□□ -1.17
SPG11-216ENST00000559347 ERCC8Q13216 396 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 KHDC3LQ587J8 217 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 FAM122CQ6P4D5 195 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 ZNF493Q6ZR52 646 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 SCGB1C1Q8TD33 95 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 RNF141Q8WVD5 230 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 FAM210BQ96KR6 192 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 FAM19A4Q96LR4 140 aa7.75□□□□□ -1.17
SPG11-216ENST00000559347 FAT2Q9NYQ8 4349 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 TRAV12-3A0A0B4J271 114 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 KLLNB2CW77 178 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
SPG11-216ENST00000559347 P0DMU3 169 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 FAM231AP0DMU4 169 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 FAM231CP0DMU5 169 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 C9orf47Q6ZRZ4 202 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 AQP10Q96PS8 301 aa7.74□□□□□ -1.17
SPG11-216ENST00000559347 C7orf71A4D174 169 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 EIF3GO75821 320 aaKnown RBP eCLIP7.73□□□□□ -1.17
SPG11-216ENST00000559347 SLC25A5P05141 298 aaKnown RBP7.73□□□□□ -1.17
SPG11-216ENST00000559347 DEFB130BP0DP73 79 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 DEFB130AP0DP74 79 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 CRISP2P16562 243 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 M6PRP20645 277 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 TAS2R45P59539 299 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 BTN1A1Q13410 526 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 ZNF266Q14584 549 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 RGS21Q2M5E4 152 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 TMEM88Q6PEY1 159 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 ASB13Q8WXK3 278 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 LINC00477Q96M19 166 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 PYGO2Q9BRQ0 406 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 AGPAT4-IT1Q9H0P7 198 aa7.73□□□□□ -1.17
SPG11-216ENST00000559347 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
SPG11-216ENST00000559347 RNF222A6NCQ9 220 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 RAB2AP61019 212 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 ACOT6Q3I5F7 207 aaPredicted RBP7.72□□□□□ -1.17
SPG11-216ENST00000559347 Q5BKY6 102 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 TMEM78Q5T7P6 136 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 PRR9Q5T870 116 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 LYPD1Q8N2G4 141 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 ZFAND2AQ8N6M9 145 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 HSD17B11Q8NBQ5 300 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 VGLL1Q99990 258 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 Q9H3A6 140 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 NOP10Q9NPE3 64 aaKnown RBP7.72□□□□□ -1.17
SPG11-216ENST00000559347 DNAH17Q9UFH2 4485 aa7.72□□□□□ -1.17
SPG11-216ENST00000559347 RBAKDNA6NC62 111 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 ATP5G1P05496 136 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 ATP5G3P48201 142 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 RANP62826 216 aaKnown RBP7.71□□□□□ -1.18
SPG11-216ENST00000559347 CD300CQ08708 224 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 PQLC2Q6ZP29 291 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 CCDC28AQ8IWP9 274 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 LINC00612Q8N6U2 182 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 POM121L12Q8N7R1 296 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 C15orf53Q8NAA6 179 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 OR2G3Q8NGZ4 309 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 Q8TAT8 98 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 LINC00467Q9BRT7 94 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 PSMG3Q9BT73 122 aaPredicted RBP7.71□□□□□ -1.18
SPG11-216ENST00000559347 ZNF492Q9P255 531 aa7.71□□□□□ -1.18
SPG11-216ENST00000559347 TRBV7-9A0A0J9YWB2 115 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 CBY3A6NI87 242 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 SNURFLB1AK76 121 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 G3V3Q6 166 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 ZNF324O75467 553 aaPredicted RBP7.7□□□□□ -1.18
SPG11-216ENST00000559347 GPX1P07203 203 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 NMBP08949 121 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 CSN1S1P47710 185 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 CDC34P49427 236 aaPredicted RBP7.7□□□□□ -1.18
SPG11-216ENST00000559347 ZNF138P52744 262 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 C11orf72Q8NBR9 251 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 OR10G4Q8NGN3 311 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 OR10G9Q8NGN4 311 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 OR10G7Q8NGN6 311 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 TNFSF18Q9UNG2 199 aa7.7□□□□□ -1.18
SPG11-216ENST00000559347 PKHD1P08F94 4074 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 FXYD6-FXYD2A0A087WZ82 144 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 A0A1W2PPV4 95 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 F5H768 121 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 ARL14EPLP0DKL9 152 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 ATP6V0CP27449 155 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 RNASE4P34096 147 aaKnown RBP7.69□□□□□ -1.18
SPG11-216ENST00000559347 ANXA2RQ3ZCQ2 193 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 UBE2DNLQ8IWF7 75 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 EIF4E3Q8N5X7 224 aaKnown RBP7.69□□□□□ -1.18
SPG11-216ENST00000559347 ZNF680Q8NEM1 530 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 OR2T35Q8NGX2 323 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 SH3BGRL3Q9H299 93 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 OTORQ9NRC9 128 aa7.69□□□□□ -1.18
SPG11-216ENST00000559347 GAGE12BA1L429 117 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 DIRC3C9JPN6 131 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 HMGB3O15347 200 aaKnown RBP7.68□□□□□ -1.18
SPG11-216ENST00000559347 GAGE7O76087 117 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 GAGE12FP0CL80 117 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 GAGE12GP0CL81 117 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 GAGE12IP0CL82 117 aa7.68□□□□□ -1.18
SPG11-216ENST00000559347 STAG3L2P0CL84 134 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms