RNA–Protein interactions for RNA: ENST00000558911.1

LRRC28-212, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-212ENST00000558911 LGALS3P17931 250 aaKnown RBP2.12□□□□□ -2.07
LRRC28-212ENST00000558911 KDELR1P24390 212 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 S100PP25815 95 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 RAB5CP51148 216 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 RBM11P57052 281 aaKnown RBP2.12□□□□□ -2.07
LRRC28-212ENST00000558911 NCS1P62166 190 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 UBE2BP63146 152 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 RPL18Q07020 188 aaKnown RBP2.12□□□□□ -2.07
LRRC28-212ENST00000558911 FUT5Q11128 374 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 KISS1Q15726 138 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 MSMO1Q15800 293 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF79Q15937 498 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 LDLRAD2Q5SZI1 272 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF322Q6U7Q0 402 aaPredicted RBP2.12□□□□□ -2.07
LRRC28-212ENST00000558911 C4orf22Q6V702 233 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 IFT20Q8IY31 132 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 LINC00612Q8N6U2 182 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 OR8D4Q8NGM9 314 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 TERB2Q8NHR7 220 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 UBALD1Q8TB05 177 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 AP1S3Q96PC3 154 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 TP53RKQ96S44 253 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 MND1Q9BWT6 205 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 C16orf95Q9H693 158 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 XAGE1AQ9HD64 81 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 NAT8BQ9UHF3 227 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 RNF11Q9Y3C5 154 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 E9PCH4 1651 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 SCN7AQ01118 1682 aa2.12□□□□□ -2.07
LRRC28-212ENST00000558911 CCNB3Q8WWL7 1395 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IBTKQ9P2D0 1353 aaPredicted RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 PLXNC1O60486 1568 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 THADAQ6YHU6 1953 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 EML6Q6ZMW3 1958 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 A0A087X0T9 212 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 MDFIC2A0A1B0GVS7 189 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TMEM212A6NML5 194 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 H3BQ85 93 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 K7ERJ3 54 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TXNDC9O14530 226 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 GGCTO75223 188 aaKnown RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 NAPSAO96009 420 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IGHV1-69P01742 117 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IGHV3-7P01780 117 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IGLV7-43P04211 117 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IGKV1-16P04430 117 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 PAEPP09466 180 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 FABP2P12104 132 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF25P17030 456 aaPredicted RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 EVI2AP22794 236 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 SDC2P34741 201 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 SRP14P37108 136 aaKnown RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 WNT4P56705 351 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 YPEL3P61236 119 aaPredicted RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 HIST1H4AP62805 103 aaKnown RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 EIF5AP63241 154 aaKnown RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 FAM229BQ4G0N7 80 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 GLYATL3Q5SZD4 288 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 ZNF705AQ6ZN79 300 aaPredicted RBP2.11□□□□□ -2.07
LRRC28-212ENST00000558911 IDO2Q6ZQW0 420 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 C2orf91Q6ZV80 131 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TRAPPC6BQ86SZ2 158 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 C10orf126Q8N4M7 172 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 C3orf22Q8N5N4 141 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TEX29Q8N6K0 151 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 SLC30A7Q8NEW0 376 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 OR51A4Q8NGJ6 313 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 OR4K15Q8NH41 348 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 CLDND2Q8NHS1 167 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 ARL11Q969Q4 196 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TMEM203Q969S6 136 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TMEM133Q9H2Q1 129 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 OR5AC2Q9NZP5 309 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 TP53TG3Q9ULZ0 132 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 ABCA4P78363 2273 aa2.11□□□□□ -2.07
LRRC28-212ENST00000558911 RTL9Q8NET4 1388 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 IRGMA1A4Y4 181 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LY6LH3BQJ8 138 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 PLXNB1O43157 2135 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 CST7O76096 145 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 WISP3O95389 354 aaPredicted RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 P0DMU3 169 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 FAM231AP0DMU4 169 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 FAM231CP0DMU5 169 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 DYNLT3P51808 116 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 TMBIM6P55061 237 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 ARPP19P56211 112 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 FXYD7P58549 80 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 RPS25P62851 125 aaKnown RBP2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LCE1CQ5T751 118 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LCE1BQ5T7P3 118 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 Q6ZR54 194 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 MIR17HGQ75NE6 70 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LYZL2Q7Z4W2 148 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 HIST3H2BBQ8N257 126 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 BPIFB6Q8NFQ5 453 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 OR4C6Q8NH72 309 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 BRK1Q8WUW1 75 aa2.1□□□□□ -2.07
LRRC28-212ENST00000558911 LXNQ9BS40 222 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms