RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 HIST1H1EP10412 219 aaKnown RBP8.57□□□□□ -1.04
TPM1-216ENST00000558910 CDKN1BP46527 198 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 ICAM4Q14773 271 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 NIPSNAP3BQ9BS92 247 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 OR51M1Q9H341 326 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 RPH3ALQ9UNE2 315 aa8.57□□□□□ -1.04
TPM1-216ENST00000558910 TRAV12-3A0A0B4J271 114 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 A8MTW9 85 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 NDUFB4O95168 129 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 GUK1Q16774 197 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 Q5BKY6 102 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 GFI1BQ5VTD9 330 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 FUT9Q9Y231 359 aa8.56□□□□□ -1.04
TPM1-216ENST00000558910 NBEAP1P0C6P0 100 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 RAB2AP61019 212 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 RANP62826 216 aaKnown RBP8.55□□□□□ -1.04
TPM1-216ENST00000558910 HSD17B11Q8NBQ5 300 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 CHAC2Q8WUX2 184 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 PHYHIPLQ96FC7 376 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 FAM167A-AS1Q96KT0 104 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 HYLS1Q96M11 299 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 AAMDCQ9H7C9 122 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 KCNIP2Q9NS61 270 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 TMEM14CQ9P0S9 112 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 DNAH10Q8IVF4 4471 aa8.55□□□□□ -1.04
TPM1-216ENST00000558910 FXYD6-FXYD2A0A087WZ82 144 aa8.54□□□□□ -1.04
TPM1-216ENST00000558910 TSPOP30536 169 aa8.54□□□□□ -1.04
TPM1-216ENST00000558910 RNASE4P34096 147 aaKnown RBP8.54□□□□□ -1.04
TPM1-216ENST00000558910 LEPP41159 167 aa8.54□□□□□ -1.04
TPM1-216ENST00000558910 UBE2L3P68036 154 aaKnown RBP8.54□□□□□ -1.04
TPM1-216ENST00000558910 SRSF3P84103 164 aaKnown RBP8.54□□□□□ -1.04
TPM1-216ENST00000558910 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
TPM1-216ENST00000558910 NDUFAF3Q9BU61 184 aa8.54□□□□□ -1.04
TPM1-216ENST00000558910 NOP10Q9NPE3 64 aaKnown RBP8.54□□□□□ -1.04
TPM1-216ENST00000558910 F5H768 121 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 BTN1A1Q13410 526 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 RGS21Q2M5E4 152 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 ANKRD39Q53RE8 183 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 Q8TAT8 98 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 FXYD5Q96DB9 178 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 VGLL1Q99990 258 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 MRPL32Q9BYC8 188 aaKnown RBP8.53□□□□□ -1.04
TPM1-216ENST00000558910 AGPAT4-IT1Q9H0P7 198 aa8.53□□□□□ -1.04
TPM1-216ENST00000558910 A0A1W2PPV4 95 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 SMLR1H3BR10 107 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 M0R2N4 97 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 TAS2R60P59551 318 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 CD300CQ08708 224 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 ACOT6Q3I5F7 207 aaPredicted RBP8.52□□□□□ -1.05
TPM1-216ENST00000558910 TMEM88Q6PEY1 159 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 UBE2DNLQ8IWF7 75 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 CCDC28AQ8IWP9 274 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 ZNF503Q96F45 646 aa8.52□□□□□ -1.05
TPM1-216ENST00000558910 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 TEX48A0A1B0GUV7 120 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 H7BYZ3 331 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 GPX1P07203 203 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 KHDC3LQ587J8 217 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 TMEM78Q5T7P6 136 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 Q6ZQT7 251 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 IQCF2Q8IXL9 164 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 TMEM256Q8N2U0 113 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 OR10G4Q8NGN3 311 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 OR10G9Q8NGN4 311 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 OR10G7Q8NGN6 311 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 Q9H3A6 140 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 PRELID1Q9Y255 219 aa8.51□□□□□ -1.05
TPM1-216ENST00000558910 IGLV2-18A0A075B6J9 118 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 GAGE12BA1L429 117 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 PLAC8L1A1L4L8 177 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 ZNF253O75346 499 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 GAGE7O76087 117 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 NUDT3O95989 172 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 GAGE12FP0CL80 117 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 GAGE12GP0CL81 117 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 GAGE12IP0CL82 117 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 CSN1S1P47710 185 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 TAS2R45P59539 299 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 PDE6HQ13956 83 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 PRR9Q5T870 116 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
TPM1-216ENST00000558910 OR2T35Q8NGX2 323 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 SH3BGRL3Q9H299 93 aa8.5□□□□□ -1.05
TPM1-216ENST00000558910 TIMM8BQ9Y5J9 83 aaPredicted RBP8.5□□□□□ -1.05
TPM1-216ENST00000558910 C7orf71A4D174 169 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 PGPA6NDG6 321 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 CBY3A6NI87 242 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 LYRM9A8MSI8 78 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 SNURFLB1AK76 121 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 GIPP09681 153 aaPredicted RBP8.49□□□□□ -1.05
TPM1-216ENST00000558910 M6PRP20645 277 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 ATP6V0CP27449 155 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 GNG5P63218 68 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 OR5I1Q13606 314 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 MRPL53Q96EL3 112 aaKnown RBP8.49□□□□□ -1.05
TPM1-216ENST00000558910 SGK494Q96LW2 274 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 LINC00477Q96M19 166 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 KRTAP4-7Q9BYR0 210 aa8.49□□□□□ -1.05
TPM1-216ENST00000558910 FRAS1Q86XX4 4008 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms