RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 CCDC28AQ8IWP9 274 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 LINC00477Q96M19 166 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 OR51M1Q9H341 326 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 AAMDCQ9H7C9 122 aa11.91□□□□□ -0.5
LRRC28-210ENST00000558879 C17orf112F2Z3M2 114 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 SSNA1O43805 119 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 NBEAP1P0C6P0 100 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 ICAM4Q14773 271 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 ZNF503Q96F45 646 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 PHYHIPLQ96FC7 376 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 LINC00467Q9BRT7 94 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 AGPAT4-IT1Q9H0P7 198 aa11.9□□□□□ -0.5
LRRC28-210ENST00000558879 HERC2O95714 4834 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 IGKV2-40A0A087WW87 121 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-210ENST00000558879 ZNF324O75467 553 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-210ENST00000558879 IGKV2D-40P01614 121 aaPredicted RBP11.89□□□□□ -0.51
LRRC28-210ENST00000558879 OR10J4P0C629 311 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 DAZ2Q13117 558 aaKnown RBP11.89□□□□□ -0.51
LRRC28-210ENST00000558879 BTN1A1Q13410 526 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 C11orf72Q8NBR9 251 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 PAXXQ9BUH6 204 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
LRRC28-210ENST00000558879 PRSS29PA6NIE9 313 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 SNURFLB1AK76 121 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 NMBP08949 121 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 RPL12P30050 165 aaKnown RBP11.88□□□□□ -0.51
LRRC28-210ENST00000558879 CD300CQ08708 224 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 PRR9Q5T870 116 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 FAM122CQ6P4D5 195 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
LRRC28-210ENST00000558879 NUDT3O95989 172 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 ANXA2RQ3ZCQ2 193 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 ZNF680Q8NEM1 530 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 ZNRF2Q8NHG8 242 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 C18orf15Q96N68 181 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 VGLL1Q99990 258 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 ATG101Q9BSB4 218 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
LRRC28-210ENST00000558879 TRBV7-9A0A0J9YWB2 115 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 GAGE12BA1L429 117 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 OR7C2O60412 319 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 GAGE7O76087 117 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 HOXA5P20719 270 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 FFAR4Q5NUL3 377 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 TMEM78Q5T7P6 136 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 SMIM3Q9BZL3 60 aa11.86□□□□□ -0.51
LRRC28-210ENST00000558879 PKD1P98161 4303 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 RBAKDNA6NC62 111 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 UBE2L3P68036 154 aaKnown RBP11.85□□□□□ -0.51
LRRC28-210ENST00000558879 KHDC3LQ587J8 217 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 Q6ZTI0 123 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 LYPD1Q8N2G4 141 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 EIF4E3Q8N5X7 224 aaKnown RBP11.85□□□□□ -0.51
LRRC28-210ENST00000558879 TMPRSS5Q9H3S3 457 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 WFDC1Q9HC57 220 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 LINC00588Q9Y4M8 146 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 ALG5Q9Y673 324 aa11.85□□□□□ -0.51
LRRC28-210ENST00000558879 H3BNG1 76 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 IFNA5P01569 189 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 M6PRP20645 277 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 TCL1AP56279 114 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 IBA57Q5T440 356 aaKnown RBP11.84□□□□□ -0.51
LRRC28-210ENST00000558879 RXFP4Q8TDU9 374 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 Q9H3A6 140 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 KIAA1109Q2LD37 5005 aa11.84□□□□□ -0.51
LRRC28-210ENST00000558879 TRAV26-1A0A087WT03 109 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 PTTG1O95997 202 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 GPX1P07203 203 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 RNASE4P34096 147 aaKnown RBP11.83□□□□□ -0.52
LRRC28-210ENST00000558879 ZNF138P52744 262 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 CCL18P55774 89 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 TAS2R45P59539 299 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 Q8TAT8 98 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 SCGB1C1Q8TD33 95 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 GNPNAT1Q96EK6 184 aaPredicted RBP11.83□□□□□ -0.52
LRRC28-210ENST00000558879 GSN-AS1Q9NRJ2 163 aa11.83□□□□□ -0.52
LRRC28-210ENST00000558879 NBDYA0A0U1RRE5 68 aa11.82□□□□□ -0.52
LRRC28-210ENST00000558879 SPINK4O60575 86 aa11.82□□□□□ -0.52
LRRC28-210ENST00000558879 OR5I1Q13606 314 aa11.82□□□□□ -0.52
LRRC28-210ENST00000558879 C1orf134Q5TEV5 83 aa11.82□□□□□ -0.52
LRRC28-210ENST00000558879 Q6ZQT7 251 aa11.82□□□□□ -0.52
LRRC28-210ENST00000558879 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
LRRC28-210ENST00000558879 SOHLH1Q5JUK2 328 aa11.81□□□□□ -0.52
LRRC28-210ENST00000558879 TP53TG3Q9ULZ0 132 aa11.81□□□□□ -0.52
LRRC28-210ENST00000558879 KLF12Q9Y4X4 402 aa11.81□□□□□ -0.52
LRRC28-210ENST00000558879 LENEPQ9Y5L5 61 aa11.81□□□□□ -0.52
LRRC28-210ENST00000558879 IGHV1OR15-1A0A075B7D0 117 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 A0A0J9YY99 117 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 DIRC3C9JPN6 131 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 RGS13O14921 159 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 CSN1S1P47710 185 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 ZNF266Q14584 549 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 PQLC2Q6ZP29 291 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 SSX7Q7RTT5 188 aa11.8□□□□□ -0.52
LRRC28-210ENST00000558879 TMED6Q8WW62 240 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms